Tag Archives: Universe

Study confirms that predictions about junk DNA by materialists are false

First, let’s see what Darwinian evolutionists predict about junk DNA, before we look at what the experiments show.

Here’s biologist John Timmer to explain the orthodox Darwinian view of DNA from 2007:

Personally, I fall into the “it’s all junk” end of the spectrum. If almost all of these sequences are not conserved by evolution, and we haven’t found a function for any of them yet, it’s hard to see how the “none of it’s junk” view can be maintained. There’s also an absence of support for the intervening view, again because of a lack of evidence for actual utility. The genomes of closely related species have revealed very few genes added from non-coding DNA, and all of the structural RNA we’ve found has very specific sequence requirements. The all-junk view, in contrast, is consistent with current data.

Got that? According to Darwinists, DNA is almost entirely junk – this is what is consistent with the view that creatures have evolved through a process of random mutation and selection. The estimates that I’ve seen from evolutionary biologists range from 95% to 99% junk. Now let’s compare the religion with science, and separate mythology from reality.

Now let’s compare that with intelligent design theorist William Dembski’s view of “junk” DNA, from 1998:

Even if we have a reliable criterion for detecting design, and even if that criterion tells us that biological systems are designed, it seems that determining a biological system to be designed is akin to shrugging our shoulders and saying God did it. The fear is that admitting design as an explanation will stifle scientific inquiry, that scientists will stop investigating difficult problems because they have a sufficient explanation already.

But design is not a science stopper. Indeed, design can foster inquiry where traditional evolutionary approaches obstruct it. Consider the term “junk DNA.” Implicit in this term is the view that because the genome of an organism has been cobbled together through a long, undirected evolutionary process, the genome is a patchwork of which only limited portions are essential to the organism. Thus on an evolutionary view we expect a lot of useless DNA. If, on the other hand, organisms are designed, we expect DNA, as much as possible, to exhibit function. And indeed, the most recent findings suggest that designating DNA as “junk” merely cloaks our current lack of knowledge about function… Design encourages scientists to look for function where evolution discourages it.

Now let’s look at the experimental evidence and see whose prediction was proven right by the progress of science.

Science Daily reports on a recent study that confirms the previous study that falsified Darwinian predictions about junk DNA.

Excerpt:

Researchers from the Gene and Stem Cell Therapy Program at Sydney’s Centenary Institute have confirmed that, far from being “junk,” the 97 per cent of human DNA that does not encode instructions for making proteins can play a significant role in controlling cell development.

[…]Using the latest gene sequencing techniques and sophisticated computer analysis, a research group led by Professor John Rasko AO and including Centenary’s Head of Bioinformatics, Dr William Ritchie, has shown how particular white blood cells use non-coding DNA to regulate the activity of a group of genes that determines their shape and function. The work is published today in the scientific journalCell.

“This discovery, involving what was previously referred to as “junk,” opens up a new level of gene expression control that could also play a role in the development of many other tissue types,” Rasko says. “Our observations were quite surprising and they open entirely new avenues for potential treatments in diverse diseases including cancers and leukemias.”

Now, this is yet another falsification of Darwinism, to go with the other papers that I keep posting about new research that falsifies Darwinism. How many papers do we need to falsify Darwinism? I think if you are in an argument over Darwinism, and you produce these articles, then you win, so long as the other person cannot produce anything. It’s also a good idea to couple these pieces of evidence with a positive case for intelligent causes operating during the origin of life and the Cambrian explosion.

Luke Barnes reviews Victor Stenger’s critique of cosmic fine-tuning

Victor Stenger is a famous “Internet Infidel” atheist, but what makes him different is that he is has a PhD in physics. He wrote a book published by the atheist publisher Prometheus Press where he explains why he thinks that the universe is not fine-tuned for embodied sentient life.

An Australian physicist named Luke Barnes decided to write a response to his book, and the response is summarized (without the math!) on Uncommon Descent. Barnes has a PhD in Astronomy from Cambridge. He did postdoctoral research in Switzerland at the Institute for Astonomy, and now he is doing more postdoctoral research at the University of Sydney . The response that he wrote does not talk about God, or explanations of why the fine-tuning happened. I have no idea where his convictions are on any of that, because his response just talks about the fine-tuning itself from a scientific point of view.

Here’s how Uncommon Descent explains Barnes’ response.

Summary:

Professor Victor Stenger is an American particle physicist and a noted atheist, who popularized the phrase, “Science flies you to the moon. Religion flies you into buildings”. Professor Stenger is also the author of several books, including his recent best-seller, The Fallacy of Fine-Tuning: How the Universe is Not Designed for Humanity (Prometheus Books, 2011). Stenger’s latest book has been received with great acclaim by atheists: “Stenger has demolished the fine-tuning proponents,” writes one enthusiastic Amazon reviewer, adding that the book tells us “how science is able to demonstrate the non-existence of god.”

Well, it seems that the great Stenger has finally met his match. Dr. Luke A. Barnes, a post-doctoral researcher at the Institute for Astronomy, ETH Zurich, Switzerland, has written a scathing critique of Stenger’s book. I’ve read refutations in my time, but I have to say, this one is devastating.

In his paper, Dr. Barnes takes care to avoid drawing any metaphysical conclusions from the fact of fine-tuning. He has no religious axe to grind. His main concern is simply to establish that the fine-tuning of the universe is real, contrary to the claims of Professor Stenger, who asserts that all of the alleged examples of fine-tuning in our universe can be explained without the need for a multiverse.

Dr. Barnes’ ARXIV paper, The Fine-Tuning of the Universe for Intelligent Life (Version 1, December 21, 2011), is available online, and I shall be quoting from it below. Since the paper is quite technical at times, I’ve omitted mathematical equations and kept the references to physical parameters to a minimum, since I simply wish to give readers an overview of what Dr. Barnes perceives as the key flaws in Professor Stenger’s book.

First, the abstract:

The fine-tuning of the universe for intelligent life has received a great deal of attention in recent years, both in the philosophical and scientific literature. The claim is that in the space of possible physical laws, parameters and initial conditions, the set that permits the evolution of intelligent life is very small. I present here a review of the scientific literature, outlining cases of fine-tuning in the classic works of Carter, Carr and Rees, and Barrow and Tipler, as well as more recent work. To sharpen the discussion, the role of the antagonist will be played by Victor Stenger’s recent book The Fallacy of Fine-Tuning: Why the Universe is Not Designed for Us. Stenger claims that all known fine-tuning cases can be explained without the need for a multiverse. Many of Stenger’s claims will be found to be highly problematic. We will touch on such issues as the logical necessity of the laws of nature; objectivity, invariance and symmetry; theoretical physics and possible universes; entropy in cosmology; cosmic inflation and initial conditions; galaxy formation; the cosmological constant; stars and their formation; the properties of elementary particles and their effect on chemistry and the macroscopic world; the origin of mass; grand unified theories; and the dimensionality of space and time. I also provide an assessment of the multiverse, noting the significant challenges that it must face. I do not attempt to defend any conclusion based on the fine-tuning of the universe for intelligent life. This paper can be viewed as a critique of Stenger’s book, or read independently.

Here’s a quote that I wanted to put out there from the paper about how widely accepted fine-tuning is among scientists:

There are a great many scientists, of varying religious persuasions, who accept that the universe is fine-tuned for life, e.g. Barrow, Carr, Carter, Davies, Dawkins, Deutsch, Ellis, Greene, Guth, Harrison, Hawking, Linde, Page, Penrose, Polkinghorne, Rees, Sandage, Smolin, Susskind, Tegmark, Tipler, Vilenkin, Weinberg, Wheeler, Wilczek. They differ, of course, on what conclusion we should draw from this fact. Stenger, on the other hand, claims that the universe is not fine-tuned.

That is a very diverse list. I know that Sandage, Ellis, Page, Tipler and Polkinghorne are theists. But I also know that Weinberg, Rees, Hawking, Greene, and Dawkins are atheists. So scientists all across the spectrum of worldview admit that the fine-tuning is real.

Now, let’s look at Barnes’ paper and see why Victor Stenger disagrees with the view of those scientists.

1) Stenger doesn’t show why the entropy at the beginning of the universe isn’t a case of fine-tuning:

Entropy

We turn now to cosmology. The problem of the apparently low entropy of the universe is one of the oldest problems of cosmology. The fact that the entropy of the universe is not at its theoretical maximum, coupled with the fact that entropy cannot decrease, means that the universe must have started in a very special, low entropy state. (p. 23)

Let’s return to Stenger’s proposed solution… Stenger takes it for granted that the universe is homogeneous and isotropic. We can see this also in his use of the Friedmann equation, which assumes that space-time is homogeneous and isotropic. Not surprisingly, once homogeneity and isotropy have been assumed, Stenger finds that the solution to the entropy problem is remarkably easy.

We conclude that Stenger has not only failed to solve the entropy problem; he has failed to comprehend it. He has presented the problem itself as its solution. Homogeneous, isotropic expansion cannot solve the entropy problem – it is the entropy problem. Stenger’s assertion that “the universe starts out with maximum entropy or complete disorder” is false. A homogeneous, isotropic spacetime is an incredibly low entropy state. Penrose (1989) warned of precisely this brand of failed solution two decades ago... (p. 26)

2) Stenger responds to calculations showing the need for fine-tuning by speculating that future calculations will overturn the ones we have now:

The Cosmological Constant, Lambda

The cosmological constant problem is described in the textbook of Burgess & Moore (2006) as “arguably the most severe theoretical problem in high-energy physics today, as measured by both the difference between observations and theoretical predictions, and by the lack of convincing theoretical ideas which address it”. A well-understood and well-tested theory of fundamental physics (Quantum Field Theory – QFT) predicts contributions to the vacuum energy of the universe that are [approx.] 10^120 times greater than the observed total value. Stenger’s reply is guided by the following principle:

Any calculation that disagrees with the data by 50 or 120 orders of magnitude is simply wrong and should not be taken seriously. We just have to await the correct calculation. [FOFT p. 219]

This seems indistinguishable from reasoning that the calculation must be wrong since otherwise the cosmological constant would have to be fine-tuned. One could not hope for a more perfect example of begging the question. More importantly, there is a misunderstanding in Stenger’s account of the cosmological constant problem. The problem is not that physicists have made an incorrect prediction. We can use the term dark energy for any form of energy that causes the expansion of the universe to accelerate, including a “bare” cosmological constant (see Barnes et al., 2005, for an introduction to dark energy). Cosmological observations constrain the total dark energy. QFT [quantum field theory – VJT] allows us to calculate a number of contributions to the total dark energy from matter fields in the universe. Each of these contributions turns out to be 10^120 times larger than the total. There is no direct theory-vs.-observation contradiction as one is calculating and measuring different things. The fine-tuning problem is that these different independent contributions, including perhaps some that we don’t know about, manage to cancel each other to such an alarming, life-permitting degree. This is not a straightforward case of Popperian falsification. (pp. 34-35)

3) Stenger doesn’t consider the full range of values when deciding if something is fine-tuned or not:

Protons, Neutrons, Electrons

We turn now to the relative masses of the three most important particles in our universe: the proton, neutron and electron, from which atoms are made. Consider first the ratio of the electron to the proton mass, … of which Stenger says: “…we can argue that the electron mass is going to be much smaller than the proton mass in any universe even remotely like ours.” [FOFT p. 164] (p. 50)

The fact that Stenger is comparing the electron mass in our universe with the electron mass in universes “like ours” is all the evidence one needs to conclude that Stenger doesn’t understand fine-tuning. The fact that universes like ours turn out to be rather similar to our universe isn’t particularly enlightening. (p. 50)

Finally, and most importantly, note carefully Stenger’s conclusion. He states that no fine-tuning is needed for the neutron-proton mass difference in our universe to be approximately equal to the up quark-down quark mass difference in our universe. Stenger has compared our universe with our universe and found no evidence of fine-tuning. There is no discussion of the life-permitting range, no discussion of the possible range of [mass(neutron) – mass(proton)] (or its relation to the possible range of [mass(down quark) – mass(up quark)], and thus no relevance to fine-tuning whatsoever. (p. 51)

Those are just a few of the examples in the paper, highlighted in the Uncommon Descent article (emphasis theirs).

UPDATE: Commenter Eugene advises me that Barnes’ paper has now been published in a peer-reviewed journal. The journal is published by Cambridge University.

Michael Strauss lectures on scientific evidence for God at UT Dallas 2013

Mysterious Chris S. posted this and I have provided a summary of the lecture below.

About Michael Strauss:

His full biography is here. (I removed his links from my excerpt text below)

Excerpt:

I had an interest in science and theology, so in 1977 I chose to go to Biola University where I could study both subjects in detail. I thoroughly enjoyed college and participated in intramural sports, was elected to student government, served as a resident assistant, competed in forensics, and studied a lot. As I neared college graduation my dual interest continued so I applied to seminary and to graduate school. After graduating summa cum laude from Biola, I decided to pursue a graduate degree in physics at UCLA.

During my first few years of graduate school, I developed an increased interest in quantum mechanics and subatomic physics and decided to do research in a field that dealt with these subjects. I joined a High Energy Physics experimental group doing research at the Stanford Linear Accelerator Center (SLAC) and moved to the San Francisco Bay Area to actively participate in research at SLAC. I graduated in 1988 with my Ph.D in High Energy Physics (a.k.a. Elementary Particle Physics). If you would like to know more about High Energy Physics, the Particle Data Group at Lawrence Berkeley Laboratory has a very nice interactive adventure that teaches you all about the subject. My research advisor was professor Charles Buchanan and my disertation was titled “A Study of Lambda Polarization and Phi Spin Alignment in Electron-Positron Annihilation at 29 GeV as a Probe of Color Field Behavior.”

After graduation, I accepted a post-doctoral research position with the University of Massachusetts at Amherst. I continued to do research at SLAC where I joined the SLD experiment. My research interests centered on the SLD silicon pixel vertex detector. I wrote most of the offline software for this device, and did physics analysis which used the vertex detector, including tagging b quark events for flavor specific QCD (Quantum Chromodynamics) analysis. In the seven years I was employed by UMASS, I only spent 3 days on the Amherst campus. The rest of the time was spent in California.

[…]In August 1995, I accepted a job as an Assistant Professor of Physics at the University of Oklahoma (OU) in Norman, Oklahoma. The University of Oklahoma has a vibrant high energy physics research group involved in experiments at the Fermi National Accelerator Center (Fermilab), and CERN. I joined the DØ experiment at Fermilab where I continue to do research in elementary particle physics. As a member of the DØ collaboration I have made contributions to the testing of silicon sensors for the upgraded vertex detector, to the track finding algorithms, to a measurement of the photon production cross section which probes the gluon content of protons, and to other QCD measurements. I am currently studying properties ofB mesons that contain a b-quark, the production cross section of jets coming from quarks and gluons, and other QCD analyses. At CERN, I am a collaborator on the ATLAS detector.

I received tenure in 2001 and was promoted to the rank of Professor in the summer of 2010. Most of the time at OU I have taught introductory physics classes to physics majors, engineers, and life science majors. In these classes I have used a number of interactive techniques to facilitate student participation and learning. I have been privileged to win a few awards for my teaching. In 1999, the Associated Students selected me as the Outstanding Professor in the College of Arts and Science, and in 2000 I was awarded the BP AMOCO Foundation Good Teaching Award. In 2002, I was given the Regents Award for Superior Teaching. I received the Carlisle Mabrey and Lurine Mabrey Presidential Professorship in 2006 which is given to “faculty members who excel in all their professional activities and who relate those activities to the students they teach and mentor.”

He seems to have done a fine job of integrating his faith with a solid career in physics research. It would be nice if we were churning out more Christian scholars who are experts in experimental science.

Note: there is a period of 19 minutes of Q&A at the end of the lecture.

The lecture:

Summary:

It used to be true that most of the great scientists were believers in God
But now science has advanced and we have better instruments – is it still true?
Today, many people believe that science has shows that the universe and Earth are not special
We used to believe that the Earth was the center of the universe, and Darwin showed we are not designed
The problem with this view is that it is based on old science, not modern science
Three topics: origin of the universe, fine-tuning of the universe, the Rare Earth hypothesis

Experimental evidence for the origin of the universe:

  • #1: Hubble discovered that the universe expands because of redshifting of light from distant galaxies
  • #2: Measurements of the cosmic microwave background radiation show the universe had a beginnning
  • #3: Measurements of the light element (hydrogen and helium) abundances confirm an origin of the universe
  • The best explanation for an absolute origin of space, time, matter and energy is a supernatural cause

Experimental evidence for the design of the universe:

  • #1: The amount of matter: a bit less = no stars and galaxies, a bit more = universe recollapses
  • #2: The strong force: a bit more = only hydrogen, a bit more = little or no hydrogen
  • #3: Carbon resonance level: a bit higher = no carbon, a bit lower = no carbon

Experimental evidence for galactic, stellar and planetary habitability:

  • #1: Galaxy: produces high number of heavy elements and low radiation
  • #2: Star: long stable lifetime, burns bright, bachelor star, third generation star (10 billion years must elapsed),
  • #3: Planet: mass of planet, stable orbit, liquid water, tectonic activity, tilt, moon

Naturalistic explanations:

  • Humans evolve to the point where they reach back in time and create finely-tuned universe
  • Eternally existing multiverse

Hawking and Mlodinow response to Rare Earth:

  • There are lots of planets so one must support life
  • Odds of a planet that supports life are low even with 10^22 planets

Hawking and Mlodinow proposal of M-theory multiverse:

  • There is no experimental evidence for M-theory being true
  • M-theory is not testable now and is not likely to be testable in the future
  • But science is about making testable predictions, not about blind speculation

Hawking and Mlodinow no-boundary proposal:

  • This theory requires the laws of physics to exist prior to the universe
  • But where do you get laws of physics before there is any physical world?
  • There is no experimental evidence for no-boundary proposal
  • All the evidence we have now (redshift, CMBR, H-He abundances) is for Big Bang

What science has revealed provide abundant evidence for a transcendent Creator and Designer

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