Tag Archives: Naturalism

New study: parrots have similar brain mechanisms to humans

A cockatoo uses a little tool he made to reach a snack
A cockatoo uses a little tool he made to reach a snack

OK, it’s a fun Friday post. I guess most of my readers know that I love almost all the birds, and especially parrots. I have owned parrots most of my life, and want to get more, too. I also like to feed the wild birds who come to visit my house. One reason I like them so much is that they are very intelligent and obviously designed by a very clever engineer.

First, let me explain what convergence is, then we’ll look at a recent peer-reviewed scientific publication.

We have to start this Science Daily post with the definition of convergence in biology.

In evolutionary biology, convergent evolution is the process whereby organisms not closely related (not monophyletic), independently evolve similar traits as a result of having to adapt to similar environments or ecological niches.

It is the opposite of divergent evolution, where related species evolve different traits.

On a molecular level, this can happen due to random mutation unrelated to adaptive changes; see long branch attraction. In cultural evolution, convergent evolution is the development of similar cultural adaptations to similar environmental conditions by different peoples with different ancestral cultures. An example of convergent evolution is the similar nature of the flight/wings of insects, birds, pterosaurs, and bats.

All four serve the same function and are similar in structure, but each evolved independently.

So, naturalists say that if two organisms have traits that are similar, it must mean that the trait evolved once in their ancestors, and then the modern species inherited the trait from those ancestors. If evolution is true, the only mechanism they have to develop traits shared by two organisms is mutation and selection. The problems occur when two organisms share similar traits, but they have no recent common ancestor, and no recent shared evolutionary history of mutation and selection.

Here’s the latest study from the New Scientist:

To learn more how these birds’ brains develop, Mello and his team compared the genome of the blue-fronted Amazon parrot with that of 30 other birds. They found that regions of the parrot genome that regulate when and how genes for brain development are turned on are the same as those found in humans. These so-called ultra-conserved elements evolved in both species at different times, but with similar results.

Well, parrots and humans are completely different creatures, with no recent evolutionary history, and no recent common ancestors. So, if these changes are due to evolution, then we should see them in the very very very distance common ancestor shared by birds and humans. But then shouldn’t they be in all the other animals who descend from that very very very distant common ancestor to?

Watch this:

I’ll tell you what the real explanation is: the real explanation is that God created birds and humans. And, like a clever engineer, he re-used components that produced the behavior he wanted in his birds and his humans. We know how this works, because this is how intelligent agents write code today. Why do we need a naturalistic theory that requires magic to work, when we have a simple explanation that we can  observe every time someone writes a blog post, or some code, or anything with information in it?

Anyway, however you feel about that, try to be kind to birds, as they are much smarter and more sensitive than most people think. Put out some bird feeders in the yard, if you don’t have an outdoor cat. And if you do have a cat, then why not put a bell on it, or keep it indoors?

Related posts

Dr. Walter Bradley lectures on scientific evidence for the creation and design of the universe

Dr. Walter L. Bradley
Dr. Walter L. Bradley

This lecture is special to me, because I bought a VHS tape of it from Access Research Network just after I started working full-time, and watched it a million times. A lot of people come to their convictions about God’s existence because of parents or church or intuitions, but for me it’s all about the scientific evidence. This lecture changed my life. I wish more people taught their children about this evidence! This lecture was delivered at the University of California, Santa Barbara.

About the speaker:

Dr. Bradley received his B.S. in Engineering Science and his Ph.D. in Materials Science from the University of Texas in Austin.

Dr. Bradley taught for eight years at the Colorado School of Mines before assuming a position as Professor of Mechanical Engineering at Texas A&M University (TAMU) in 1976.

During his 24 years at Texas A&M, Dr. Bradley served as Head of the Department of Mechanical Engineering at Texas A&M University and as Director of the Polymer Technology Center, and received five College of Engineering Research Awards. He has received over $4,500,000 in research grants and has published over 140 technical articles and book chapters. He has also co-authored “The Mystery Of Life’s Origin: Reassessing Current Theories. He is a Fellow of the American Society for Materials and of the American Scientific Affiliation and serves as a consultant for many Fortune 500 companies.

He currently serves as Distinguished Professor of Engineering at Baylor University.

The lecture: (63 minutes lecture, 25 minutes audience Q&A)

Summary slide:

This slide summarizes the content of the lecture
This slide summarizes the content of the lecture

Introduction:

  • At the beginning of the 20th century, people believed that the progress of science was pointing away from an intelligent Creator and Designer, and towards naturalism
  • A stream of new discoveries has shifted the support of science towards theism, and away from naturalism
  • Richard Dawkins, an atheist, says that nature only has the appearance of design, but that if you look closer, naturalistic mechanisms can account for the appearance of design
  • When deciding between design and apparent design (“designoid”), it matters whether you think there is an intelligence there to do the designing

Evidence #1: The Big Bang:

  • an eternal “steady state” universe is more compatible with naturalism, but a created universe is more compatible with a Creator
  • In 1929, Hubble used telescopes to observe that the light from distant galaxies was redshifted. The further away galaxies were, the faster they were moving away. Therefore, space is expanding in all directions, suggesting an explosive origin of the universe
  • In 1965, the discovery of the cosmic microwave background radiation matched a prediction of the Big Bang cosmology, and of the creation event
  • In 1992, the COBE space telescope allowed us to test four specific predictions of the Big Bang model, especially the predictions for light element abundances (hydrogen and helium), which matched the predictions of the creation model

Evidence #2: Simple mathematical structure of the physical laws

  • the simple mathematical structure of natural laws allows us to understand these laws, make discoveries, and engineer solutions to problems
  • early scientists saw the mathematical structure of the universe to mean that nature was designed by an intelligent to be understood
  • the fundamental equations of the laws of the universe can be easily written on one side of one sheet of paper
  • Eugene Wigner’s famous paper, “The Unreasonable Effectiveness of Mathematics in the Physical Sciences” makes the point that this simple structure is an unexpected gift that allows is to do science

Evidence #3: fine-tuning of the physical constants and quantities

  • in order for any kind of complex life to survive, we need stars that provide energy within specific ranges for long periods of time
  • in order for any kind of complex life to survive, we need planets with stable orbits that will not suffer from extreme temperature swings as it varies in distance from its star
  • in order for any kind of complex life to survive, we need stable atomic structure
  • in order for any kind of complex life to survive, we need to have chemical diversity and correct relative abundances of each element
  • organic life has minimum requirements: process energy, store information, replicate, and you can’t fulfill those functions if there is only one element, e.g. – hydrogen
  • the energy level from the photons from the sun have to match the energy levels of the different elements in order to drive the chemical bonding needed for life
  • These requirements for life of any imaginable type depend on the values of the constants and quantities. The constants and quantities cannot vary much from what they are, or the universe will lose the characteristics (above) that allow it to support complex life of any imaginable time
  • For example, ratio of strong force to electromagnetic force:
    – if 2% larger, then no stable hydrogen, no long-lived stars, no compounds containing hydrogen, e.g. – water
    – if 5% smaller, no stable stars, heavy hydrogen would be unstable, few elements other than hydrogen

Evidence #4: initial conditions for habitability

  • Universe: expansion rate of the universe must be fast enough to avoid a re-collapse, but slow enough to allow matter to clump together and form stars and planets for complex life to live on
  • Planet: right distance from the star to get the right climate
  • Planet: right mass to retain the right atmosphere

Evidence #5: origin of life and information theory

  • It’s possible to explain every process in an automobile engine using plain old naturalistic mechanisms – no supernatural explanation is necessary to understand the processes
  • But the existence of engine itself: engineering all the parts has to be explained by the work of an intelligence
  • Similarly, we can understand how living systems work, but the existence of the living systems requires an intelligence
  • Even the simplest living system has to perform minimal function: capture energy, store information and replicate
  • Living systems are composed of objects like proteins that are composed of sequences of components complex such that the order of the components gives the overall structure function
  • Developing the components for a simple living cell is very improbable – even given the large number of galaxies, stars and planets in the universe, it is unlikely that complex, embodied life would exist anywhere in the universe

Evidence #6: more initial conditions for habitability

  • Location within the galaxy: you need to be away from the center of the galaxy, because the explosions from dying stars, and excessive radiation will kill life
  • Location within the galaxy: you need to be close enough to the center in order catch the heavy elements you need for life from the explosions of other stars
  • Location within the galaxy: the best location is between two arms of  a spiral galaxy, where you can get the heavy elements you need from dying stars, but without being hit with explosions and harmful radiation
  • Star mass: determines rate at which the sun burns, determines the energy level of photons that are used to drive chemical bonding reactions, determines the length of time the star will be stable
  • Star mass: star mass must be the correct value in order to allow liquid water on the planet’s surface, while still preserving stable orbit

I wish there was more curiosity about science in churches, and young Christians understood how critical science is for grounding the rationality of the Christian worldview. We need to be training up more scientists who think about the big questions, like Dr. Walter Bradley.

Are the Galapagos finch beaks evidence of Darwinian evolution?

I have a key that will unlock a puzzling mystery
I have a key that will unlock a puzzling mystery

Jonathan Wells has an article about it at Evolution News.

It says:

When Charles Darwin visited the Galápagos Islands in 1835, he collected specimens of the local wildlife. These included some finches that he threw into bags, many of them mislabeled. Although the Galápagos finches had little impact on Darwin’s thinking (he doesn’t even mention them in The Origin of Species), biologists who studied them a century later called them “Darwin’s finches” and invented the myth that Darwin had correlated differences in the finches’ beaks with different food sources (he hadn’t). According to the myth, Darwin was inspired by the finches to formulate his theory of evolution, thoughaccording to historian of science Frank Sulloway “nothing could be further from the truth.”

In the 1970s, biologists studied a population of medium ground finches on one of the islands in great detail. When a severe drought left only large, hard-to-crack seeds, 85 percent of the birds perished. The survivors had beaks that were about 5 percent larger than the average beak size in the original population. The biologists estimated that if similar droughts occurred once every ten years, the population could become a new species in only 200 years. In a 1999 booklet defending evolution, the U.S. National Academy of Sciences called the finches “a particularly compelling example” of the origin of species.

But after the drought, birds with smaller beaks flourished again, and the average beak size of the population returned to normal. No net evolution had occurred. No matter; Darwin’s finches became an icon of evolution that is still featured in most biology textbooks.

In the 1980s, a population of large ground finches, with larger beaks than the medium ground finches, migrated to the island. When a drought in 2004-2005 again reduced the food supply, the medium and large ground finch populations both declined. But since even the largest beaks among the medium ground finches were no match for the beaks of the large ground finches, the latter pretty much monopolized the larger seeds and the former had to make do with smaller seeds. This time, the medium ground finches that survived the drought had beaks that were smaller than the average size in the original population. Biologists studying the finches argued that birds with smaller beaks were better able to eat the tiny seeds that were left after the large ground finches ate the big ones, and they concluded that this was again an example of “evolutionary change.”

[…]Wait a minute. Average beak size increased slightly during one drought, only to return to normal after the rains return. Then average beak size decreased slightly during another drought. A region of DNA is correlated with beak size. And somehow that tells us how finches evolved in the first place?

There is an important distinction to make between micro-evolution and macro-evolution. Changes within a type is micro-evolution. Evolving a new organ type or body plan is macro-evolution. There is plenty of evidence for micro-evolution, but no evidence for macro-evolution.

What needs to be proven by the Darwinists is that the same process that results in different average beak size in a population of finches after a drought can create the finches in the first place. I think that Darwinists are credulous – they believe what they want to believe because they want to believe it, even if the evidence is incredibly weak. Darwinists must demonstrate that heritable variations can result in the generation of new organ types and body plans. Changes in average beak size is not interesting. What is needed is to show how the beaks, much less the wings, evolved in the first place.

Icons of Evolution

Jonathan has actually written about a number of  misleading things that you may mind in Biology textbooks.

Here are the sections in his book “Icons of Evolution“:

  • The Miller-Urey Experiment
  • Darwin’s Tree of Life
  • Homology in Vertebrate Limbs
  • Haeckel’s Embroys
  • Archaeopteryx–The Missing Link
  • Peppered Moths
  • Darwin’s Finches
  • Four-Winged Fruit Flies
  • Fossil Horses and Directed Evolution
  • From Ape to Human: The Ultimate Icon

Dr. Wells holds a Ph.D in Molecular and Cell Biology from the University of California at Berkeley.

Cosmologist Luke Barnes answers 11 objections to the fine-tuning argument

Christianity and the progress of science
Christianity and the progress of science

This is from the blog Common Sense Atheism.

Atheist Luke Muehlhauser interviews well-respect cosmologist Luke Barnes about the fine-tuning argument, and the naturalistic response to it.

Luke M. did a good job explaining the outline of the podcast.

Details:

In one of my funniest and most useful episodes yet, I interview astronomer Luke Barnes about the plausibility of 11 responses to the fine-tuning of the universe. Frankly, once you listen to this episode you will be better equipped to discuss fine-tuning than 90% of the people who discuss it on the internet. This episode will help clarify the thinking of anyone – including and perhaps especially professional philosophers – about the fine-tuning of the universe.

The 11 responses to fine-tuning we discuss are:

  1. “It’s just a coincidence.”
  2. “We’ve only observed one universe, and it’s got life. So as far as we know, the probability that a universe will support life is one out of one!”
  3. “However the universe was configured, evolution would have eventually found a way.”
  4. “There could be other forms of life.”
  5. “It’s impossible for life to observe a universe not fine-tuned for life.”
  6. “Maybe there are deeper laws; the universe must be this way, even though it looks like it could be other ways.”
  7. “Maybe there are bajillions of universes, and we happen to be in one of the few that supports life.”
  8. “Maybe a physics student in another universe created our universe in an attempt to design a universe that would evolve intelligent life.”
  9. “This universe with intelligent life is just as unlikely as any other universe, so what’s the big deal?”
  10. “The universe doesn’t look like it was designed for life, but rather for empty space or maybe black holes.”
  11. “Fine-tuning shows there must be an intelligent designer beyond physical reality that tuned the universe so it would produce intelligent life.”

Download CPBD episode 040 with Luke Barnes. Total time is 1:16:31.

There is a very good explanation of some of the cases of fine-tuning that I talk about most on this blog – the force of gravity, the strong force, etc. as well as many other examples. Dr. Barnes is an expert, but he is also very very easy to listen to even when talking about difficult issues. Luke M. is very likeable as the interviewer.

Stephen C. Meyer and Doug Axe discuss 5 major problems with macro-evolution

Undeniable: How Biology Confirms Our Intuition That Life Is Designed
Undeniable: How Biology Confirms Our Intuition That Life Is Designed

The host of the Cross Examined radio show Dr. Frank Turek talks with Stephen C. Meyer and Doug Axe about a recent conference of Royal Society scientists discussing the problems with the theory of macro-evolution.

The MP3 file is here.

Summary:

  • about the Royal Society conference
  • the main topic was whether naturalistic mechanisms can produce new body plans and new organ types
  • no one disputes micro-evolution: beaks changing size, antibiotic resistance
  • many of the naturalistic scientists admitted the problems with current naturalistic theories, but they don’t want to embrace the need for a designer
  • none of the proposals that were debated solved the real problems with macro-evolution
  • Problem #1: the sudden origin of body plans in the fossil record
  • Problem #2: the origin of information (e.g. – in protein molecule)
  • Problem #3: need for favorable early mutations (for body plans)
  • Problem #4: the problem of epigenetics
  • Problem #5: the universality of the design intuition

Some of these problems have actually gotten worse for naturalistic evolution as our scientific knowledge has grown.

If you want the two best books on intelligent design, get Dr. Meyer’s “Signature in the Cell” and “Darwin’s Doubt”. I should note that Dr. Meyer is not a young Earth creationist, and has defended the Big Bang cosmology as a solid evidence for a Creator of the universe. Being in favor of an old universe and an old Earth is compatible with being opposed to evolution – because of scientific reasons.