Tag Archives: Mutation

Ann Gauger’s new peer-reviewed paper on Darwinian evolution

Amazing new research paper by the Biologic Institute. The PDF of the paper, “Reductive Evolution Can Prevent Populations from Taking Simple Adaptive Paths to High Fitness,” is available here.

The MP3 file is here.

Participants

  • Jay Richards, Director of Research at the CRSC, (Discovery Institute)
  • Ann Gauger, senior research scientist at the Biologic Institute

About Ann:

Ann is a senior research scientist at Biologic Institute. Her work uses molecular genetics and genomic engineering to study the origin, organization and operation of metabolic pathways. She received a BS in biology from MIT, and a PhD in developmental biology from the University of Washington, where she studied cell adhesion molecules involved in Drosophila embryogenesis. As a post-doctoral fellow at Harvard she cloned and characterized the Drosophila kinesin light chain. Her research has been published in Nature, Development, and the Journal of Biological Chemistry.

Topics:

  • Co-authored with microbiologist Ralph Seelke at the University of Wisconsion
  • Purpose: study whether bacteria can evolve the ability to fix a broken protein (e.g. – enzyme)
  • Two areas are broken in the enzyme
  • If you fix the first one, it works a little but not fully (slight advantage)
  • If you fix the second one, it starts to work fully (huge advantage)
  • It’s a “two-step adaptive path” – a textbook case for evolution
  • should be able to hit both mutations and get back full functionality
  • At the start of the experiment, the cell is churning out broken protein
  • there is a cost to the cell for create the broken protein
  • the cell can either go through the adaptive path and repair the protein
  • OR, it can shut off production of the broken protein
  • EITHER PATH gives a selective advantage
  • So what happens? The cells NEVER followed the adaptive path
  • They almost ALWAYS turn off the production of the broken protein
  • It happens in 30-50 generations, in 14 different cultures
  • Each culture had a different way of turning off the production
  • They tested on 10^12 cells
  • Only one cell made the first repair, none made the second repair
  • It’s more advantageous to STOP PRODUCING the broken protein as soon as possible
  • The first cell that gets rid of the non-functional protein first overtakes the whole culture
  • so, even adaptive paths that provide a benefit with one mutation are unlikely to be followed
  • The point: even promising theoretical adaptive pathways MAY NOT WORK in experiments

I wrote about Doug Axe’s recent research paper here. He is the Director of the Biologic Institute.

Related posts

Phillip E. Johnson lectures on science and the pre-supposition of materialism

Have you all heard of Phillip E. Johnson, the UC Berkeley professor who is the father of the intelligent design movement?

Here is a lecture by Phil in which he explains the relationship with materialist philosophy and the practice of science.

The MP3 file for lecture is here. There is some Q&A at the end.

Topics:

  • Can the diversity of life be explained by purposeless material processes?
  • What can changes over time have scientists actually observed?
  • What is the difference between micro-evolution and macro-evolution?
  • Has macro-evolution ever been observed?
  • Can observations of micro-evolution be extrapolated to prove unobserved macro-evolution?
  • What causes people to doubt that material processes can account for all of life?
  • Is evolution compatible with Judeo-Christian monotheism?
  • How do scientists respond when you ask them for evidence of macro-evolution?
  • Are observable mutations generally helpful or harmful?
  • How do scientists who pre-suppose materialism deal with dissenting scientists?
  • Why was the theory of Darwinian evolution accepted by early scientists?

Highly recommended. Phil is one of my favorite authors.

The one point you need to take away from this lecture is that if a scientist assumes a philosophy of materialism, then they will never be able to find evidence of intelligent causation in nature. They can look at all the evidence they want, or no evidence at all, and the answer will always be “no-God did it”.

So, consider the Big Bang. No-God did it. The fine-tuning? No-God did it. The origin of life? No-God did it. Molecular machines? No-God did it. Cambrian explosion. No-God did it. Origin of consciousness? No-God did it. Origin of free will? No-God did it. Origin of human rights? No-God did it. Origin of objective morality? No-God did it. Bodily resurrection? No-God did it. Galactic fine-tuning? No-God did it. Planetary fine-tuning? No-God did it. And so on. What else could have done it, once you assume matter is all there is?

The thing to do is to ask them what reasons they have for believing that this pre-supposition of materialism is absolute and undeniable. What is the evidence for it, that does not already assume it?

But many people change their pre-suppositions as evidence piles up that they are wrong. A combined approach is best. Surface their pre-suppositions and make them defend them. Then, stack up evidence against the pre-suppositions, e.g. – how can matter be all there is if science shows us that the entire physical universe came into being out of nothing in the Big Bang?

BloggingHeadsTV restores censored video interview of Michael Behe

You can watch the video here, where Michael Behe is interviewed on a variety of topics by an atheist, who is nevertheless impressed by Behe’s book.

Topics:

  • Michael’s book, “The Edge of Evolution” (04:29)
  • Malaria and evolution (06:56)
  • Do proteins point to teleology? (05:59)
  • Have we really hit a wall of understanding? (04:08)
  • Challenges to Michael’s theory of irreducible complexity (05:28)
  • John: The boredom objection to intelligent design (09:13)

Here is Robert Wright’s comment about the restoration of the interview:

This diavlog has now been re-posted. The decision to remove it from the site was made by BhTV staff while I was away and unavailable for consultation…. It’s impossible to say for sure whether, in the heat of the moment, I would have made a decision different from the staff’s decision. But on reflection I’ve decided that removing this particular diavlog from the site is hard to justify by any general principle that should govern our future conduct. In other words, it’s not a precedent I’d want to live with.

Kick off the audio, (or download the MP3), and then read the comments of the Darwinists.

Comments from open-minded, tolerant Darwinists

Many of the commenters don’t mention the interview at all – they didn’t watch it.

Here’s one comment:

I’ve listened to a few seconds of this diavlog, enough to hear John McWhorter call Behe’s nonsense “a very important book.” I can’t remember the last time I lost so much respect for someone so quickly.

And another:

Grab the popcorn: this is bound to be a good thread. (Doubtful I’ll actually watch the diavlog.)

And one last one:

If this creationism thing keeps up no one will want to be on bhtv anymore. A spinoff site is better than no site for us regular viewers. Who’s with me?

Who can have any confidence in a theory when the adherents cannot even be bothered to listen to a tenured biochemist explain his own research which contradicts that theory?