Tag Archives: Nature

Has the progress of science vindicated Mike Behe or Ken Miller?

ECM send me a couple of articles recently from Uncommon Descent and Evolution News that I wanted to write about.

The topic is Junk DNA, which is the name given by naturalists to the portions of the DNA code that do not code for proteins. Is Junk DNA really just leftover junk from a blind, purposeless process of fully naturalistic evolution? Or does it have a function, like intelligent design theorists say? Let’s put these predictions to the test and then update our worldviews to fit with the scientific evidence.

The prediction of Ken Miller

Anti-theistic biologist Ken Miller said in 1994 that DNA is filled with junk left over from naturalistic, random evolution:

…the designer made serious errors, wasting millions of bases of DNA on a blueprint full of junk and scribbles.

Ken Miller

One thing you have to like about Ken is that he manages to fit in some predictions along with his factually incorrect statements under oath.

The prediction of Michael Behe

Theistic biologist Michael Behe said in 2002 that DNA isn’t as junky some people think, because of the evidence:

As a public skeptic of the ability of Darwinian processes to account for complex cellular systems and a proponent of the hypothesis of intelligent design, (1) I often encounter a rebuttal that can be paraphrased as “no designer would have done it that way.” …
If at least some pseudogenes have unsuspected functions, however, might not other biological features that strike us as odd also have functions we have not yet discovered? Might even the backwards wiring of the vertebrate eye serve some useful purpose?
….
Hirotsune et al’s (3) work has forcefully shown that our intuitions about what is functionless in biology are not to be trusted.

Sincerely, Michael J. Behe
An Open Letter to Nature

Those are the two predictions.

So, what does the progress of science say to confirm one prediction or the other? Well, let’s see what Nature, the most prestigious peer-reviewed science journal, has to say.

In 1961, French biologists François Jacob and Jacques Monod proposed the idea that ‘regulator’ proteins bind to DNA to control the expression of genes. Five years later, American biochemist Walter Gilbert confirmed this model by discovering the lac repressor protein, which binds to DNA to control lactose metabolism in Escherichia colibacteria1. For the rest of the twentieth century, scientists expanded on the details of the model, but they were confident that they understood the basics. “The crux of regulation,” says the 1997 genetics textbook Genes VI (Oxford Univ. Press), “is that a regulator gene codes for a regulator protein that controls transcription by binding to particular site(s) on DNA.”

Just one decade of post-genome biology has exploded that view. Biology’s new glimpse at a universe of non-coding DNA — what used to be called ‘junk’ DNA — has been fascinating and befuddling. Researchers from an international collaborative project called the Encyclopedia of DNA Elements (ENCODE) showed that in a selected portion of the genome containing just a few per cent of protein-coding sequence, between 74% and 93% of DNA was transcribed into RNA2. Much non-coding DNA has a regulatory role; small RNAs of different varieties seem to control gene expression at the level of both DNA and RNA transcripts in ways that are still only beginning to become clear. “Just the sheer existence of these exotic regulators suggests that our understanding about the most basic things — such as how a cell turns on and off — is incredibly naive,” says Joshua Plotkin, a mathematical biologist at the University of Pennsylvania in Philadelphia.

On the Evolution News post, pro-ID guy Rob Crowther writes:

…not that long ago, junk DNA was being defended as an important element of the Darwinian evolution paradigm… The question now seems to be whether Ayala, Dawkins, Collins, Falk and other junk DNA proponents will continue to defend junk DNA, whatever they call it?

The post by Rob Crowther has more information on this story.

If you are one of those people who thinks that naturalistic molecules-to-man evolution is as proved as is the fact that the Earth goes around the Sun, then check out the links below – ESPECIALLY the debates. Peter Atkins, Michael Shermer and Lewis Wolpert are some of the most prominent prominent proponents of naturalism and materialism out there. Watch the debates. Have an open mind. If science can be hijacked by global warmists, then it can be hijacked by evolutionists, too. We need to guard against that.

I know there is a lot of pressure on people to just believe in naturalism, especially when their degree or career depends on a public profession of faith in the power of chance and material processes. But we have to follow the evidence – science is about evidence, not ideology. Science is about testing to see what is true, not forcing the evidence to confirm what you want to believe (e.g. – materialism). There is a difference between the religious assumption of naturalism/materialism and the scientific method of predicting and testing.

Related posts

Learn more about intelligent design

Phillip E. Johnson lectures on science and the pre-supposition of materialism

Have you all heard of Phillip E. Johnson, the UC Berkeley professor who is the father of the intelligent design movement?

Here is a lecture by Phil in which he explains the relationship with materialist philosophy and the practice of science.

The MP3 file for lecture is here. There is some Q&A at the end.

Topics:

  • Can the diversity of life be explained by purposeless material processes?
  • What can changes over time have scientists actually observed?
  • What is the difference between micro-evolution and macro-evolution?
  • Has macro-evolution ever been observed?
  • Can observations of micro-evolution be extrapolated to prove unobserved macro-evolution?
  • What causes people to doubt that material processes can account for all of life?
  • Is evolution compatible with Judeo-Christian monotheism?
  • How do scientists respond when you ask them for evidence of macro-evolution?
  • Are observable mutations generally helpful or harmful?
  • How do scientists who pre-suppose materialism deal with dissenting scientists?
  • Why was the theory of Darwinian evolution accepted by early scientists?

Highly recommended. Phil is one of my favorite authors.

The one point you need to take away from this lecture is that if a scientist assumes a philosophy of materialism, then they will never be able to find evidence of intelligent causation in nature. They can look at all the evidence they want, or no evidence at all, and the answer will always be “no-God did it”.

So, consider the Big Bang. No-God did it. The fine-tuning? No-God did it. The origin of life? No-God did it. Molecular machines? No-God did it. Cambrian explosion. No-God did it. Origin of consciousness? No-God did it. Origin of free will? No-God did it. Origin of human rights? No-God did it. Origin of objective morality? No-God did it. Bodily resurrection? No-God did it. Galactic fine-tuning? No-God did it. Planetary fine-tuning? No-God did it. And so on. What else could have done it, once you assume matter is all there is?

The thing to do is to ask them what reasons they have for believing that this pre-supposition of materialism is absolute and undeniable. What is the evidence for it, that does not already assume it?

But many people change their pre-suppositions as evidence piles up that they are wrong. A combined approach is best. Surface their pre-suppositions and make them defend them. Then, stack up evidence against the pre-suppositions, e.g. – how can matter be all there is if science shows us that the entire physical universe came into being out of nothing in the Big Bang?

Is pre-suppositionalism a Biblical way of defending the faith?

I’m a classical apologist, so I do use pre-suppositional arguments to question my opponents about whether their non-Christian worldviews can ground rationality and objective morality, etc. But I also use evidential arguments from nature and history. Some people think that evidential arguments should not be used and that they are not as persuasive as pre-suppositional arguments.

When I look the Bible, I don’t see any Biblical support for the view that pre-suppositional apologetics is the only approved way of defending the faith. Instead, the standard method seems to be evidentialism.

In Romans 1, Paul writes that people can learn about God’s existence from the natural world.

Romans 1:18-23:

18The wrath of God is being revealed from heaven against all the godlessness and wickedness of men who suppress the truth by their wickedness,

19since what may be known about God is plain to them, because God has made it plain to them.

20For since the creation of the world God’s invisible qualities—his eternal power and divine nature—have been clearly seen, being understood from what has been made, so that men are without excuse.

21For although they knew God, they neither glorified him as God nor gave thanks to him, but their thinking became futile and their foolish hearts were darkened.

22Although they claimed to be wise, they became fools

23and exchanged the glory of the immortal God for images made to look like mortal man and birds and animals and reptiles.

And in Acts, Peter appeals to eyewitness testimony for the resurrection, and Jesus’ miracles.

Acts 2:22-24, and 36:

22“Men of Israel, listen to this: Jesus of Nazareth was a man accredited by God to you by miracles, wonders and signs, which God did among you through him, as you yourselves know.

23This man was handed over to you by God’s set purpose and foreknowledge; and you, with the help of wicked men, put him to death by nailing him to the cross.

24But God raised him from the dead, freeing him from the agony of death, because it was impossible for death to keep its hold on him.

And finally from the same chapter:

36“Therefore let all Israel be assured of this: God has made this Jesus, whom you crucified, both Lord and Christ.”

So, I see that God uses nature and miracles to persuade, which can be assessed using scientific and historical methods. Can anyone find me a clear statement that states that only pre-suppositional arguments should be used? I could be wrong, and I am willing to be proven wrong.