Tag Archives: Microbiology

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Study confirms that predictions about junk DNA by materialists are false

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First, let’s see what Darwinian evolutionists predict about junk DNA, before we look at what the experiments show.

Here’s biologist John Timmer to explain the orthodox Darwinian view of DNA from 2007:

Personally, I fall into the “it’s all junk” end of the spectrum. If almost all of these sequences are not conserved by evolution, and we haven’t found a function for any of them yet, it’s hard to see how the “none of it’s junk” view can be maintained. There’s also an absence of support for the intervening view, again because of a lack of evidence for actual utility. The genomes of closely related species have revealed very few genes added from non-coding DNA, and all of the structural RNA we’ve found has very specific sequence requirements. The all-junk view, in contrast, is consistent with current data.

Got that? According to Darwinists, DNA is almost entirely junk – this is what is consistent with the view that creatures have evolved through a process of random mutation and selection. The estimates that I’ve seen from evolutionary biologists range from 95% to 99% junk. Now let’s compare the religion with science, and separate mythology from reality.

Now let’s compare that with intelligent design theorist William Dembski’s view of “junk” DNA, from 1998:

Even if we have a reliable criterion for detecting design, and even if that criterion tells us that biological systems are designed, it seems that determining a biological system to be designed is akin to shrugging our shoulders and saying God did it. The fear is that admitting design as an explanation will stifle scientific inquiry, that scientists will stop investigating difficult problems because they have a sufficient explanation already.

But design is not a science stopper. Indeed, design can foster inquiry where traditional evolutionary approaches obstruct it. Consider the term “junk DNA.” Implicit in this term is the view that because the genome of an organism has been cobbled together through a long, undirected evolutionary process, the genome is a patchwork of which only limited portions are essential to the organism. Thus on an evolutionary view we expect a lot of useless DNA. If, on the other hand, organisms are designed, we expect DNA, as much as possible, to exhibit function. And indeed, the most recent findings suggest that designating DNA as “junk” merely cloaks our current lack of knowledge about function… Design encourages scientists to look for function where evolution discourages it.

Now let’s look at the experimental evidence and see whose prediction was proven right by the progress of science.

Science Daily reports on a recent study that confirms the previous study that falsified Darwinian predictions about junk DNA.

Excerpt:

Researchers from the Gene and Stem Cell Therapy Program at Sydney’s Centenary Institute have confirmed that, far from being “junk,” the 97 per cent of human DNA that does not encode instructions for making proteins can play a significant role in controlling cell development.

[…]Using the latest gene sequencing techniques and sophisticated computer analysis, a research group led by Professor John Rasko AO and including Centenary’s Head of Bioinformatics, Dr William Ritchie, has shown how particular white blood cells use non-coding DNA to regulate the activity of a group of genes that determines their shape and function. The work is published today in the scientific journalCell.

“This discovery, involving what was previously referred to as “junk,” opens up a new level of gene expression control that could also play a role in the development of many other tissue types,” Rasko says. “Our observations were quite surprising and they open entirely new avenues for potential treatments in diverse diseases including cancers and leukemias.”

Now, this is yet another falsification of Darwinism, to go with the other papers that I keep posting about new research that falsifies Darwinism. How many papers do we need to falsify Darwinism? I think if you are in an argument over Darwinism, and you produce these articles, then you win, so long as the other person cannot produce anything. It’s also a good idea to couple these pieces of evidence with a positive case for intelligent causes operating during the origin of life and the Cambrian explosion.

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New study confirms that predictions about junk DNA by Darwinian naturalists are false

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First, let’s see what Darwinian evolutionists predict about junk DNA, before we look at what the experiments show.

Here’s biologist John Timmer to explain the orthodox Darwinian view of DNA from 2007:

Personally, I fall into the “it’s all junk” end of the spectrum. If almost all of these sequences are not conserved by evolution, and we haven’t found a function for any of them yet, it’s hard to see how the “none of it’s junk” view can be maintained. There’s also an absence of support for the intervening view, again because of a lack of evidence for actual utility. The genomes of closely related species have revealed very few genes added from non-coding DNA, and all of the structural RNA we’ve found has very specific sequence requirements. The all-junk view, in contrast, is consistent with current data.

Got that? According to Darwinists, DNA is almost entirely junk – this is what is consistent with the view that creatures have evolved through a process of random mutation and selection. The estimates that I’ve seen from evolutionary biologists range from 95% to 99% junk. Now let’s compare the religion with science, and separate mythology from reality.

Now let’s compare that with intelligent design theorist William Dembski’s view of “junk” DNA, from 1998:

Even if we have a reliable criterion for detecting design, and even if that criterion tells us that biological systems are designed, it seems that determining a biological system to be designed is akin to shrugging our shoulders and saying God did it. The fear is that admitting design as an explanation will stifle scientific inquiry, that scientists will stop investigating difficult problems because they have a sufficient explanation already.

But design is not a science stopper. Indeed, design can foster inquiry where traditional evolutionary approaches obstruct it. Consider the term “junk DNA.” Implicit in this term is the view that because the genome of an organism has been cobbled together through a long, undirected evolutionary process, the genome is a patchwork of which only limited portions are essential to the organism. Thus on an evolutionary view we expect a lot of useless DNA. If, on the other hand, organisms are designed, we expect DNA, as much as possible, to exhibit function. And indeed, the most recent findings suggest that designating DNA as “junk” merely cloaks our current lack of knowledge about function… Design encourages scientists to look for function where evolution discourages it.

Now let’s look at the experimental evidence and see whose prediction was proven right by the progress of science.

Science Daily reports on a new study that confirms the previous study that falsified Darwinian predictions about junk DNA.

Excerpt:

Researchers from the Gene and Stem Cell Therapy Program at Sydney’s Centenary Institute have confirmed that, far from being “junk,” the 97 per cent of human DNA that does not encode instructions for making proteins can play a significant role in controlling cell development.

[…]Using the latest gene sequencing techniques and sophisticated computer analysis, a research group led by Professor John Rasko AO and including Centenary’s Head of Bioinformatics, Dr William Ritchie, has shown how particular white blood cells use non-coding DNA to regulate the activity of a group of genes that determines their shape and function. The work is published today in the scientific journalCell.

“This discovery, involving what was previously referred to as “junk,” opens up a new level of gene expression control that could also play a role in the development of many other tissue types,” Rasko says. “Our observations were quite surprising and they open entirely new avenues for potential treatments in diverse diseases including cancers and leukemias.”

Now, this is yet another falsification of Darwinism, to go with the other papers that I keep posting about new research that falsifies Darwinism. How many papers do we need to falsify Darwinism? Or maybe belief in Darwinism is like belief in naturalism: just a philosophical presupposition that is not accountable to the evidence at all.

News

William Dembski reviews a new book by two theistic evolutionists

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From Patheos, an opening statement by William Dembski. This is the first part of a four-part debate with two scientists of the Biologos group, which advocates for theistic evolution. (And not to be confused with the Biologic Institute, which is supportive of intelligent design).

Excerpt:

Throughout their book, Giberson and Collins overconfidently proclaim that Darwinian evolution is a slam-dunk. Thus one reads, “There has been no scientific discovery since Darwin–not one–which has suggested that evolution is not the best explanation for the origin of species” (21-22). No theory is that good. Every theory admits anomalies. Every theory faces disconfirming evidence. Repeatedly readers are informed that mountains of overwhelming evidence support Darwin’s theory and that the authors are “unfamiliar with any premier scientists who reject evolution.” And just so there’s no doubt, in that same paragraph, they reiterate, “There are certainly a few scientists who reject evolution . . . But these are never premier scientists.”

Oh, you reject Darwinian evolution; you can’t be a premier scientist. What counterexample would convince Giberson and Collins to retract such a claim? How about Henry Schaefer’s signature on a “Dissent from Darwin” list? Schaefer heads the computational quantum chemistry lab at the University of Georgia, has published over a thousand peer-reviewed journal articles, and is one of the most widely cited chemists in the world. Then again, Giberson and Collins look askance at this list (according to them, it has too many emeriti professors and not enough biologists). But why engage in such posturing about scientific pecking order in the first place? The issue is not who’s doubting Darwinism, but what are the arguments for and against it and whether they have merit. Giberson and Collins’ constant drumming of mainstream and consensus science is beside the point–science progresses by diverging from the mainstream and by breaking with consensus.

Because Giberson and Collins assert that natural selection is such a powerful mechanism for driving evolution–and one that admits no reasoned dissent–it’s worth recounting here briefly why the intelligent design community is so skeptical of it. It’s not, as theistic evolutionists often suggest, that we have a desperate need to shore up faith and morality and are using ID as our instrument of choice to accomplish that end. Rather, it’s that natural selection is, in essence, a trial and error tinkering mechanism for which all evidence suggests that its power is quite limited. Trial and error works fine when you have something that’s functional and are trying to enhance it or adapt it to a new situation.

But for natural selection, as a trial and error mechanism, to traverse vast swatches of biological function space, we need to see an extended series of small gradual structural changes (under neo-Darwinism, these are genetic mutations leaving effects at the phenotypic level) that continually improve, or at least maintain, function, with evolving functions and evolving structures covarying and reinforcing each other. But we know of no detailed testable (macro-)evolutionary pathways like this in any field, whether in the evolution of living forms or in the evolution of language or in the evolution of technologies. In fact, when we can trace such evolutionary pathways, we find that significant change happens in creative leaps, not via trial and error tinkering.

Everyone who has read Dembski’s opening remarks in this four-part series is raving about the quality of what he’s written. I was hoping to wait for the response before publishing his opening salvo, so we could balance it, but no reply has appeared yet. For me, there is only one issue in the debate about the origin of life: if natural causes can create life from non-life with the time and resources available on the early Earth, then show me the mechanism. That’s all I want to see – the evidence that natural causes can do the creating that the naturalists say that it can do. I don’t want to hear about feelings, possibilities, what God could or couldn’t do, philosophy, what church you attend, your favorite hymn, the way you were raised, your religious experiences, etc. I just want to see you prove that nature can do all the creating that you say it can do.