Tag Archives: Science

Does peer-reviewed research support a naturalistic origin of life?

There was a recent debate between Dr. James Tour and Professor Dave, an atheist with a bachelors degree who makes YouTube videos. The atheist spent his entire opening speech attacking Tour’s character. When Tour asked him to show him origin of life chemistry, he refused. The atheist shuffled through papers he apparently found by Googling, and read the titles. When asked what was in them, he said that he couldn’t remember.

But I was trying to decide who won the debate. There was one place where the atheist claimed that the early Earth had no molecular oxygen. He needs that to be true, in order for the chemistry that creates the building blocks of life to work. So I thought I would talk about a paper that refutes that. After my argument, I’ll talk about another mistake that the atheist made in the debate. Based on those two mistakes, I concluded that the atheist was speaking errors either intentionally or unintentionally, and therefore lost the debate.

Here’s a paper published in the prestigious peer-reviewed science journal Nature, entitled “The oxidation state of Hadean magmas and implications for early Earth’s atmosphere”.

Evolution News explains what the paper is about.

Excerpt:

A recent Nature publication reports a new technique for measuring the oxygen levels in Earth’s atmosphere some 4.4 billion years ago. The authors found that by studying cerium oxidation states in zircon, a compound formed from volcanic magma, they could ascertain the oxidation levels in the early earth. Their findings suggest that the early Earth’s oxygen levels were very close to current levels.

[…]Miller and Urey conducted experiments to show that under certain atmospheric conditions and with the right kind of electrical charge, several amino acids could form from inorganic compounds such as methane, ammonia, and water. Several experiments have been done using various inorganic starting materials, all yielding a few amino acids; however, one key aspect of all of these experiments was the lack of oxygen.

If the atmosphere has oxygen (or other oxidants) in it, then it is an oxidizing atmosphere. If the atmosphere lacks oxygen, then it is either inert or a reducing atmosphere. Think of a metal that has been left outside, maybe a piece of iron. That metal will eventually rust. Rusting is the result of the metal being oxidized. With organic reactions, such as the ones that produce amino acids, it is very important that no oxygen be present, or it will quench the reaction. Scientists, therefore, concluded that the early Earth must have been a reducing environment when life first formed (or the building blocks of life first formed) because that was the best environment for producing amino acids. The atmosphere eventually accumulated oxygen, but life did not form in an oxidative environment.

The problem with this hypothesis is that it is based on the assumption that organic life must have formed from inorganic materials. That is why the early Earth must have been a reducing atmosphere. Research has been accumulating for more than thirty years, however, suggesting that the early Earth likely did have oxygen present.

[…]Their findings not only showed that oxygen was present in the early Earth atmosphere, something that has been shown in other studies, but that oxygen was present as early as 4.4 billion years ago. This takes the window of time available for life to have begun, by an origin-of-life scenario like the RNA-first world, and reduces it to an incredibly short amount of time. Several factors need to coincide in order for nucleotides or amino acids to form from purely naturalistic circumstances (chance and chemistry). The specific conditions required already made purely naturalist origin-of-life scenarios highly unlikely. Drastically reducing the amount of time available, adding that to the other conditions needing to be fulfilled, makes the RNA world hypothesis or a Miller-Urey-like synthesis of amino acids simply impossible.

If you read the paper’s abstract, it finds that molecular oxygen would have been present by the end of the Hadean era. The earliest signs of life we have are from just after the end of the Hadean era. So, its undeniable that molecular oxygen was present. Did professor Dave lie, or was he just ignorant? One thing for sure, he pronounced that there was no oxygen in the same confident, insulting voice that he used for the rest of his presentation.

OK, so with that out of the way, Professor Dave also cited a paper in the journal Science. And there is an article on Creation.com by Johnathan Sarfati, who has a PhD in chemistry, about that very paper.

His post says:

It’s likely that the media reports you mention were referring to the paper in Science journal by Tracey Lincoln and Gerald Joyce.1 Quite often, the media hype just doesn’t match what was actually discovered. To be fair, Joyce, a well known chemical evolutionist, made it clear that he and his Ph.D. student Lincoln had not produced life, despite the headlines.2 Much earlier, Joyce admitted:

“The most reasonable assumption is that life did not start with RNA … . The transition to an RNA world, like the origins of life in general, is fraught with uncertainty and is plagued by a lack of experimental data.”3

Joyce and Lincoln started off with a fairly long RNA molecule. Given that nothing like RNA appears in Miller–Urey experiments, this already shows unjustified interference from an intelligent investigator. In fact, not even the building blocks, ribonucleotides, appear in such experiments, and they do not spontaneously form RNA. In fact, there are numerous chemical difficulties with obtaining RNA by blind undirected chemistry, the only sort allowed on the hypothetical primordial earth, as chemical evolutionist A.G. Cairns-Smith points out in his book Genetic Takeover4 (see extract at Cairns Smith: Detailed criticisms of the RNA world hypothesis). And it’s a huge step from RNA to the genetic code, its major use today.

Furthermore, this paper didn’t demonstrate replication but ligation—joining two small RNA pieces, previously designed to be a match to the longer strand. So this research already assumed not just one but three RNA strands. For this to be relevant to chemical evolution, the two pieces just by chance had to have pretty close to the complementary base pairs of the first piece—natural selection could not be invoked before reproduction.

Furthermore, since polymerization is unfavorable, the RNA pieces must be chemically activated in some way. Note that a catalyst merely accelerates the approach to equilibrium; it doesn’t change it (see diagram and explanation in Dino proteins and blood vessels: are they a big deal?). The paper states that one of the two joining RNA strands has a triphosphate group on the end. This is very reactive, so would be an unlikely component of a primordial soup, and would not last long even if it appeared. So a supply of matching activated RNA pieces likewise shows unacceptable investigator interference.

See also Does ribozyme research prove Darwinian evolution? for a critique of an earlier Joyce paper on alleged ribozyme evolution, as well as Self-replicating peptides? which has many similarities to the recent Joyce claim.

Now Tour seemed to let this problem drop in the debate. It just seems that Professor Dave was assuming from the titles of the papers that they were relevant to the problem of life. Well, scientists always sound optimistic in their papers. I know, I had to write one for my masters degree thesis, and it was published. That’s why you have to look at the data and be skeptical. Sadly Dave wasn’t able to be skeptical. He wanted something to be true, so he just didn’t bother to interact with challenges to his view. The whole problem with the origin of life is that there are many counter-factual conditions, experimenter interferences, etc. that have to be done to make things work at all. Dave reads the titles of papers, but he just isn’t aware of how the experimenters have adjusted the experiments in ways that are not true to the conditions on the early Earth.

Dr. Tour lost his temper and shouted a lot during the debate, so I don’t think the debate is worth watching. However, if you want to watch a good debate on the origin of life, try this one between Dr. Fazale Rana vs Dr. Michael Ruse. And if you want to see a good explanation of the sequencing problem, check out this lecture by Dr. Stephen C. Meyer. (who has also debated atheists who didn’t lie, shout or insult him – and they even had doctoral degrees)

William Lane Craig debates Alex Rosenberg: Does God Exist? Video, audio and summary

Here is the video of the debate:

Here is my summary of the Craig-Rosenberg debate, which occurred on February 1st, 2013 at Purdue University.

The debaters

Below is the summary.

Dr. Craig’s opening speech:

The topic: What are the arguments that make belief in God reasonable or unreasonable?
First speech: arguments for reasonableness of belief in God
Second speech: respond to arguments against reasonableness of belief in God

Eight arguments:

  1. Contingency argument: God – a transcendent, personal being – is the explanation of why a contingent universe exists.
  2. Cosmological argument: God is the cause of the beginning of the universe, which is attested by physics and cosmology.
  3. Applicability of mathematics to nature: God is the best explanation for the applicability of mathematics to nature.
  4. Fine-tuning argument: God is the best explanation of the fine-tuning of the universe to permit life.
  5. Intentionality of conscious states: God is the best explanation of the intentionality of our mental states.
  6. The moral argument: God is the best explanation for the existence of objective moral values and duties.
  7. The resurrection of Jesus: God is the best explanation for the core of historical facts accepted by most ancient historians across the ideological spectrum.
  8. Religious experience: God is the best explanation of our immediate experience and knowledge of his existence.

Dr. Rosenberg’s opening speech

First argument: The fallacy of ad hominem

  • I don’t know whether to laugh or to cry
  • Dr. Craig has said all of that before in other debates
  • You didn’t need to come out on this cold night
  • Craig’s arguments have all been refuted
  • Dr. Craig just doesn’t listen
  • Dr. Craig is not interested in getting at the truth
  • Dr. Craig is just interested in scoring debate points
  • The adversarial system is the wrong approach to decide truth
  • Dr. Craig is very confident about his take of physics

Second argument: The fallacy of arguing from authority

  • 95% of members of the NAS are atheists
  • Therefore Dr. Craig cannot use science

Third argument: Effects don’t require causes

  • I am going to pretend that Craig said that “every effect requires a cause”
  • Quantum mechanics shows that some effects occur without causes
  • A particle of uranium (which is not nothing, it is something) decays without a cause
  • This uncaused effect is the same as the universe coming into being out of nothing uncaused
  • Therefore the principle of sufficient reason is false

Fourth argument: Silicon-based life and the multiverse

  • If these constants had been different, maybe we would have other kinds of intelligent life, like silicon-based life
  • Carbon-based life is not the only kind of life, maybe you can have other kinds of life, none of which have been observed
  • There could be different kinds of life in other areas of the universe that we can’t see
  • There are things we can’t see that disprove the current physics that we can see
  • Quantum foam is evidence that a multiverse exists
  • The multiverse would solve the problem of fine-tuning

Fifth argument: The Euthyphro dilemma

  • The moral argument is refuted by Euthyphro dilemma
  • Dr. Craig is such a moron that he has never heard of the Euthyphro dilemma ever before
  • This is found in the first and simplest of Plato’s dialogs
  • Why is Dr. Craig so stupid that he has not read this simple dialog ever before?
  • Evolution explains why humans evolve arbitrary customs and conventions that vary by time and place
  • Alternative moral theories: utilitarianism, social contract, etc. that don’t require God

Sixth argument: Mormonism undermines Dr. Craig’s three minimal facts about Jesus

  • Why is Dr. Craig so stupid and ignorant to persist in pushing such an ignorant, stupid argument?
  • Mormonism is a silly religion that is not historically well founded
  • Therefore, Jesus was not buried
  • Islam is a silly religion that is not historically grounded
  • Therefore, the tomb was not found empty
  • Scientology is a silly religion that is not historically grounded
  • Therefore, the eyewitnesses didn’t have post-mortem appearances
  • Eyewitness testimony is unreliable in some cases
  • Therefore, eyewitness testimony was unreliable in this case
  • Apparitions of Mary are bizarre
  • Therefore, the majority of historians are wrong to think that the disciples saw post-mortem appearances

Seventh argument: Deductive problem of evil

  • Evil and suffering are logically incompatible with an all good, all powerful God

Eight argument: God is not just to allow evil and suffering

  • God cannot make the evils of this life right in the afterlife

Dr. Craig’s first rebuttal

Dr. Rosenberg sketched the deductive argument from evil.

Dr. Rosenberg presupposes naturalism. Naturalism is a false theory of knowledge:

1. It’s too restrictive: There are truths that cannot be proved by natural science.
2. It’s self-refuting: no scientific proof for naturalism exists.

That’s why epistemological naturalism is considered false by most philosophers of science.

But more importantly than that: Epistemological naturalism does not imply metaphysical naturalism. (E.g. – W. Quine)

Dr. Rosenberg has to present arguments in favor of (metaphysical) naturalism, not just assume that (metaphysical) naturalism is true.

Dr. Craig presented eight arguments against metaphysical naturalism taken from Rosenberg’s own book:

1. The argument from the intentionality (aboutness) of mental states implies non-physical minds (dualism), which is incompatible with naturalism
2. The existence of meaning in language is incompatible with naturalism, Rosenberg even says that all the sentences in his own book are meaningless
3. The existence of truth is incompatible with naturalism
4. The argument from moral praise and blame is incompatible with naturalism
5. Libertarian freedom (free will) is incompatible with naturalism
6. Purpose is incompatible with naturalism
7. The enduring concept of self is incompatible with naturalism
8. The experience of first-person subjectivity (“I”) is incompatible with naturalism

Metaphysical naturalism is false: it is irrational and it contradicts our experience of ourselves.

And epistemological naturalism is compatible with theism.

Rebutting Dr. Rosenberg’s responses:

1. Contingency: no response

2. Cosmological: he mis-states the first premise to say every effect… when it is whatever begins to exist…, the origin of the universe was not from a vacuum, virtual particles come from a vacuum not nothing, there are interpretations of QM that are compatible with determinism. Rosenberg has to believe that the entire universe popped into being from non-being.

3. Mathematics: no response

4. Fine-tuning: the multiverse is refuted by empirical observations of the universe. Without fine-tuning, it’s not that we still have silicon to make life out of. It’s that we lose basic minimal things like chemical diversity, matter, stars, planets, etc. No life of any kind, not just no carbon-based life.

5. Intentionality: no response.

6. Moral argument: the answer to the dilemma is that you split the dilemma: God is the standard of good, and the commands flow from his unchanging moral nature. The commands are not arbitrary, and the standard is not external to God. Dr. Rosenberg is a nihilist and he cannot ground good and evil on his nihilistic view.

7. Resurrection: The Gospels are early eyewitness testimony. Mormonism and Islam have nothing to do with the minimal set of historical facts about Jesus agreed to by the majority of ancient historians across the ideological spectrum, general statements against eyewitnesses do not refute the specific eyewitness testimony in this case.

8. Religious experience: No response.

Dr. Rosenberg’s first rebuttal

I wrote a book and you should buy it, because it got me invited to this debate. Let me repeat the title a few times for you. Please buy it.

Dr. Craig is right, there are multiple interpretations of QM, not just the one I presented, including deterministic ones.

All the disturbing implications of naturalism that Dr. Craig stated follow from metaphysical naturalism, and metaphysical naturalism is true. (Note: he equates science with metaphysical naturalism)

Science proves that metaphysical naturalism is true, but I won’t say what specific scientific tests prove my philosophical assumption of metaphysical naturalism.

I’ll pretend that the Big Bang (science) doesn’t disprove naturalism, like Dr. Craig said. Again. (covers ears) La la la, there is no Big Bang.

We didn’t come here to debate epistemological naturalism and metaphysical naturalism.

Let me explain the problem of intentionality since I’m so smart and no one knows what it means.

There are many answers to this problem of intentionality.

My answer is that most scientists are naturalists, therefore naturalism is true, regardless of the argument from intentionality of mental states.

That’s how I would respond to one of the eight problems with naturalism that Dr. Craig raised. I won’t answer the other seven problems.

It is an argument from ignorance to argue that the applicability of mathematics to the universe requires a designer, because there are non-Euclidean geometries. Craig’s argument, which he gets from people like respected physicists like Eugene Wigner, is bizarre. It is bizarre, therefore I refute Eugene Wigner and all the other scholars who make that argument. It is bizarre! Bizarre!

Deductive problem of evil: there is no response to this argument, certainly not Alvin Plantinga’s free will defense. The deductive argument from evil has not been entirely abandoned at all! It’s not like arch-atheist J.L. Mackie himself admits that the deductive problem of evil doesn’t lead to a logical inconsistency between evil and God.

Dr. Craig has to tell me why God allows evil or God doesn’t exist.

It is offensive that Dr. Craig cannot tell me why God allows every evil and suffering that occurs.

He literally said this: “I will become a Christian if Dr. Craig can tell me why God allowed EVERY EVIL THAT OCCURRED IN THE LAST 3.5 BILLION YEARS”

Dr. Craig’s second rebuttal

We are not in a position to know why God allows specific instances of evil and suffering.

God cannot force people to freely do anything – freedom is not compatible with determinism. Freedom is a good, but freedom opens up the possibility of moral evil. You cannot have the good of free will without allowing people to choose to do morally evil things.

God can permit evil and suffering in order to bring more people into a relationship with him.

The atheist has to show that God could allow less evil and achieve more knowledge of God in order to say there is too much evil.

The purpose of life is not happiness, but knowledge of God.

Dr. Craig quotes agnostic Paul Draper (Purdue) and Peter Van Inwagen (Notre Dame) to state that the deductive problem of evil is dead because of free will and morally sufficient reasons for permitting evil.

1. Contingency: no response.

2. Cosmological: QM does not apply, because the universe came from nothing, not a vacuum, and QM only works in a vacuum.

3. Mathematics: He mentions alternatives like non-Euclidean geometry, but we have to explain the structure of THIS universe.

4. Fine-tuning: ???

5. Intentional states: intentional mental states proves that minds exist, which fits with theism better than it fits with atheism.

6. Moral argument: You need God to ground morality, and Dr. Rosenberg believes in morality. He needs God to ground objective moral values and duties.

7. Historical argument: He has to respond to the minimal facts supported by the consensus of ancient historians across the ideological spectrum.

8. The problems of naturalism: He says that you can’t have science without naturalism, but you can have science with EPISTEMOLOGICAL NATURALISM, and theists accept science and methodological naturalism. We don’t accept METAPHYSCIAL NATURALISM because of the eight problems Craig presented, like intentionality, first-person, persistence of self, etc. You can believe in both science and theism, by embracing epistemological naturalism, while rejecting methaphysical naturalism.

Dr. Rosenberg’s second rebuttal

Dr. Craig hasn’t answered many of my points, I won’t say which ones though.

Debates don’t work as a way of deciding what’s true, so we should overturn the entire criminal justice system.

The principle of sufficient reason is false because it is disconfirmed by quantum mechanics. And quantum mechanics (vacuum and virtual particles that exist for a short time) is similar to the origin of the universe (nothing and entire universe and 14 billion years).

We know that alpha particles come into being without cause all the time from a quantum vacuum for a tiny sub-second duration before going out of existence, so we can say that the entire physical universe came into being for 14 billion years from absolute nothing which is not a quantum vacuum.

Peter Van Inwagen is the best metaphysician working today, and he says that my deductive argument from evil is not decisive, it’s not a successful argument. (Why is he undermining his own problem of evil argument????!)

Dr. Craig invoked Plantinga’s free will defense to the deductive POE. Freedom allows us to do evil. God could have given us free will without evil and suffering. I won’t show how, but I’ll just assert it, because debates are such a bad forum for supplying evidence for my speculative assertions.

If you answer the question 3 + 5 as being 8, then you don’t have free will – you are biologically determined if you answer 8, because everyone answers 8, and that means everyone is biologically determined with no free will.

Why can’t God give us free will and then prevent us from making a free choice?

No scholars date the gospels earlier than 60-70 AD, especially not atheists like James Crossley who dates Mark to 40 AD. Therefore Jesus’ burial isn’t historical, like the majority of scholars across the broad spectrum of scholarship agree it is.

The original New Testament documents were written in Aramaic.

All New Testament scholars are orthodox Christians, like atheist Robert Funk for example.

Dr. Craig’s concluding speech

In order to sustain the deductive argument from evil, Dr. Rosenberg must show that God could create a world of free creatures with less evil.

Principle of Sufficient Reason: not using the general principle of sufficient reason, but a more modest version of this states that contingent things should have an explanation for their existence. And we know that the universe is a contingent.

The New Testament was not written in Aramaic, they were written in Greek. Dr. Rosenberg is wrong there too.

(Dr. Craig spends the rest of his concluding speech giving his testimony and urging people to investigate the New testament).

Dr. Rosenberg’s concluding speech

Some long-dead French guy named Laplace said that he has no need of that (God) hypothesis. He did not know about any of Dr. Craig’s arguments made in this debate tonight when he said that, though.

There is no need to explain how the universe began or how the universe is finely-tuned if you just assume metaphysical naturalism on faith.

The Easter Bunny, therefore atheism.

Most scientists are atheists, therefore atheism.

You can do a lot of science without God, just don’t look at the origin of the universe, the fine-tuning of the universe, or the other parts of science that Craig mentioned, as well as the origin of life, the Cambrian explosion, the habitability argument, and so on.

You can be a Christian, but good Christians should not use arguments and evidence.

Good Christians should be irrational and ignorant. Bad Christians look for arguments and evidence from science and history.

Good Christians should embrace the absurd. Bad Christians want to search for truth and use logic and evidence.

Physicist Michael Strauss discusses Christianity and science at Stanford University

This is one of my favorite lectures.

The lecture:

Dr. Strauss delivered this lecture at Stanford University in 1999. It is fairly easy to understand, and it even includes useful dating tips.

Here is a clip:

The full video can be watched on Vimeo:

Summary:

What does science tell us about God?
– the discoveries of Copernicus made humans less significant in the universe
– the discoveries of Darwin should that humans are an accident
– but this all pre-modern science
– what do the latest findings of science say about God?

Evidence #1: the origin of the universe
– the steady state model supports atheism, but was disproved by the latest discoveries
– the oscillating model supports atheism, but was disproved by the latest discoveries
– the big bang model supports theism, and it is supported by multiple recent discoveries
– the quantum gravity model supports atheism, but it pure theory and has never been tested or confirmed by experiment and observation

Evidence #2: the fine-tuning of physical constants for life
– there are over 100 examples of constants that must be selected within a narrow range in order for the universe to support the minimal requirements for life
– example: mass density
– example: strong nuclear force (what he studies)
– example: carbon formation

Evidence #3: the fine-tuning of our planet for habitability
– the type of galaxy and our location in it
– our solar system and our star
– our planet
– our moon

It’s a good lecture explaining a couple of basic arguments for a cosmic Creator and Designer. If you add the origin of life and the Cambrian explosion (Stephen C. Meyer’s arguments), then you will be solid on the basic scientific arguments for a Creator and Designer of the universe.

Positive arguments for Christian theism