Tag Archives: Intelligent Design

New study: rising oxygen levels rejected as explanation of Cambrian explosion

Christianity and the progress of science
Christianity and the progress of science

So, just to refresh everyone, the Cambrian explosion was an event that occurred about 543 million years ago. In a very short period of time, less than 10 million years, probably 3-5 million, all of the major animal body plans emerged.

Here’s what the Cambrian explosion looks like:

Cambrian Explosion
Cambrian Explosion

The Darwinian theory says that there should be precursors to all of the new phyla that appear. But we have never been able to find any precursors. We’ve been looking in the fossil record for the slow transition from simple life to complex life that Darwin predicted, but we’ve never been able to find anything that explains the sudden emergence of the body plans in the Cambrian explosion.

There is no known naturalistic explanation for the rapid emergence of these “phyla”. But, naturalists were holding out hope that maybe a sudden rise in the level of oxygen might have “triggered” the required increase in complexity.

This is from Science Daily.

Excerpt:

Oxygen is crucial for the existence of animals on Earth. But, an increase in oxygen did not apparently lead to the rise of the first animals. New research shows that 1.4 billion years ago there was enough oxygen for animals — and yet over 800 million years went by before the first animals appeared on Earth.

Animals evolved by about 600 million years ago, which was late in Earth’s history. The late evolution of animals, and the fact that oxygen is central for animal respiration, has led to the widely promoted idea that animal evolution corresponded with a late a rise in atmospheric oxygen concentrations.

“But sufficient oxygen in itself does not seem to be enough for animals to rise. This is indicated by our studies,” say postdoc Emma Hammarlund and Professor Don Canfield, Nordic Center for Earth Evolution, University of Southern Denmark.

[…]The new study is published in the journal Proceedings of National Academy of Sciences.

[…]The results differ from other studies and raise several questions, such as: Why then did animals rise so late in Earth’s history?

“The sudden diversification of animals probably was a result of many factors. Maybe the oxygen rise had less to do with the animal revolution than we previously assumed,” says Hammarlund.

Now look here. I don’t see how a rise in oxygen level can create new body plans. Body plans are written in sequences of symbols – in proteins and DNA. I can no more believe that a rise in oxygen levels could create new animal body plans than I could believe that raising the level of oxygen in a computer lab could explain the new code that is being written by the software engineers. Body plans are information, and new body plans require new information. Information comes from software engineers – intelligent agents – not from rising oxygen levels.

In any case, the hypothesis was falsified. It isn’t the first time a naturalistic hypothesis for the Cambrian explosion was shot down (see below) and it won’t be the last.

Related posts

Robin Collins and atheist Peter Millican discuss the fine-tuning of the universe for life

British Spitfire and German Messerschmitt Me 109 locked in a dogfight
British Spitfire and German Messerschmitt Me 109 locked in a dogfight

You might remember Peter Millican from the debate he had with William Lane Craig. I ranked that debate as one of the 3 best I have ever seen, along with the first Craig  vs Dacey debate and the second Craig vs Sinnott-Armstrong debate.

Details:

Science has revealed that the fundamental constants and forces of the cosmos appear to be exquisitely fine-tuned to allow a universe in which life can develop. Is God the best explanation of the incredibly improbable odds of the universe we live in being a life-permitting one?

Robin Collins is a Christian philosopher and a leading advocate of the argument for God from cosmic design. Peter Millican is an atheist philosopher at Oxford University. They debate the issues.

From ‘Unbelievable?’ on ‘Premier Christian Radio’, Saturday 19th March 2016.

The debate:

MP3 file is available on the Unbelievable web site.

As usual when the atheist is an expert, there is no snark or paraphrasing in the summary.

Summary

Brierley: What is the fine-tuning argument?

Collins: the fine-tuning is structure of the universe is extremely precisely set to allow the existing of conscious, embodied agents who are capable of moral behavior. There are 3 kinds of fine-tuning: 1) the laws of nature (mathematical formulas), 2) the constants of physics (numbers that are plugged into the equations), 3) the initial conditions of the universe. The fine-tuning exists not just because there are lots of possibilities, but there is something special about the actual state of affairs that we see. Every set of laws, parameters and initial conditions is equally improbable, but the vast majority of permutations do not permit life. The possible explanations: theism or the multiverse.

Brierley: How improbable are the numbers?

Collins: Once case is the cosmological constant (dark energy density), with is 1 part in (10 raised to 120th power). If larger, the universe expands too rapidly for galaxies and stars to form after the Big Bang. If smaller, the universe collapses in on itself before life could form. Another case is the initial distribution of mass energy to give us the low entropy we have that is necessary for life. The fine-tuning there is 1 part in (10 raised to the 10th power raised to the 123rd power).

Brierley: What do you think of the argument?

Millican: The argument is worth taking very seriously. I am a fan of the argument. The other arguments for God’s existence such as the ontological and cosmological arguments are very weak. But the fine-tuning argument has the right structure to deliver the conclusion that theists want. And it is different from the traditional design argument tended to focus on biological nature, which is not a strong argument. But the fine-tuning argument is strong because it precedes any sort of biological evolution. Although the design is present at the beginning of the universe, it is not visible until much later. The argument points to at least deism, and possibly theism. The argument is not based on ignorance, it is rooted in “the latest results from the frontiers of science” (his phrase).

Brierley: Is this the best argument from natural theology?

Collins: The cosmological argument makes theism viable intuitively, but there are some things that are puzzling, like the concept of the necessary being. But the fine-tuning argument is decisive.

Brierley: What’s are some objections to the fine-tuning argument?

Millican: The argument is based on recent physics, so we should be cautious because we maybe we will discover a natural explanation.

Brierley: Respond to that.

Collins: The cosmological constant has been around since 1980. But the direction that physics is moving in is that there are more constants and quantities being discovered that need to be fine-tuned, not less. Even if you had a grand unified theory, that would have to be have the fine-tuning pushed into it.

(BREAK)

Millican: Since we have no experience of other laws and values from other universes, we don’t know whether these values can be other than they are. Psychologically, humans are prone to seeing purpose and patterns where there is none, so maybe that’s happening here.

Brierley: Respond to that.

Collins: It is possible to determine probabilities on a single universe case, for example using multiple ways of calculating Avogadro’s number all converging on the same number makes it more probable.

Millican: Yes, I willing to accept that these constants can take on other values, (“principle of indifference”). But maybe this principle be applied if the improbability were pushed up into the theory?

Collins: Even if you had a grand theory, selecting the grand theory from others would retain the improbability.

Brierley: What about the multiverse?

Millican: What if there are many, many different universes, and we happen to be in the one that is finely-tuned, then we should not be surprised to observe fine-tuning. Maybe a multiverse theory will be discovered in the future that would allow us to have these many universes with randomized constants and quantities. “I do think that it is a little bit of a promissary note”. I don’t think physics is pointing to this right now.

Brierley: Respond to that.

Collins: I agree it’s a promissary note. This is the strongest objection to the fine-tuning argument. But there are objections to the multiverse: 1) the fine-tuning is kicked back up to the multiverse generator has to be set just right to produce universes with different constants, 2) the multiverse is more likely to produce a small universe with Boltzmann brains that pop into existence and then out again, rather than a universe that contains conscious, embodied intelligent agents. I am working on a third response now that would show that the same constants that allow complex, embodied life ALSO allow the universe to be discoverable. This would negate the observer-selection effect required by the multiverse objection.

Brierley: Respond to that.

Millican: I don’t see why the multiverse generator has to be fine-tuned, since we don’t know what the multiverse generator is. I’m not impressed by the Boltzmann brains, but won’t discuss. We should be cautious about inferring design because maybe this is a case where we are seeing purpose and design where there is none.

Brierley: Can you negate the discoverability of the universe by saying that it might be psychological?

Collins: These things are not psychological. The selected value for the cosmic microwave background radiation is fine-tuned for life and for discoverability. It’s not merely a discoverability selection effect, it’s optimal for discoverability. If baryon-photon value were much smaller, we would have known that it was not optimal. So that judgment cannot be explained by

Millican: That’s a very interesting new twist.

Brierley: Give us your best objection.

Millican: I have two. 1) Even if you admit to the fine-tuning, this doesn’t show a being who is omnipotent and omnisicient. What the fine-tuning shows is that the designer is doing the best it can given the constraints from nature. If I were God, I would not have made the universe so big, and I wouldn’t have made it last 14 billion years, just to make one small area that supports life. An all-powerful God would have made the universe much smaller, and much younger. 2) The fine-tuning allows life to exist in other solar systems in other galaxies. What does this alien life elsewhere mean for traditional Christian theology? The existence of other alien civilizations argues against the truth of any one religion.

Brierley: Respond to those.

Collins: First objection: with a finite Creator, you run into the problem of having to push the design of that creature up one level, so you don’t really solve the fine-tuning problem. An unlimited being (non-material, not composed of parts) does not require fine-tuning. The fine-tuning is more compatible with theism than atheism. Second objection: I actually do think that it is likely that are other universes, and life in other galaxies and stars, and the doctrine of the Incarnation is easily adaptable to that, because God can take on multiple natures to appear to different alien civilizations.

Other resources (from WK)

If you liked this discussion, be sure and check out a full length lecture by Robin Collins on the fine-tuning, and a shorter lecture on his very latest work. And also this the Common Sense Atheism podcast, featuring cosmologist Luke Barnes, who answers about a dozen objections to the fine-tuning argument.

John C. Sanford’s genetic entropy hypothesis

Christianity and the progress of science
Christianity and the progress of science

JoeCoder sent me a recent peer-reviewed paper by John C. Sanford, so I’ve been trying to find something written by him at a layman’s level so I could understand what he is talking about.

Dr. Sanford’s CV is posted at the Cornell University web page.

I found this 20-minute video of an interview with him, in which he explains his thesis:

The most important part of that video is Sanford’s assertion that natural selection cannot remove deleterious mutations from a population faster than they arrive.

And I also found a review of a book that he wrote that explains his ideas at the layman level.

It says:

Dr. John Sanford is a plant geneticist and inventor who conducted research at Cornell University for more than 25 years. He is best known for significant contributions to the field of transgenic crops, including the invention of the biolistic process (“gene gun”).

[…]Sanford argues that, based upon modern scientific evidence and the calculations of population geneticists (who are almost exclusively evolutionists), mutations are occurring at an alarmingly high rate in our genome and that the vast majority of all mutations are either harmful or “nearly-neutral” (meaning a loss for the organism or having no discernible fitness gain). Importantly, Sanford also establishes the extreme rarity of any type of beneficial mutations in comparison with harmful or “nearly-neutral” mutations. Indeed, “beneficial” mutations are so exceedingly rare as to not contribute in any meaningful way. [NOTE: “Beneficial” mutations do not necessarily result from a gain in information, but instead, these changes predominantly involve a net loss of function to the organism, which is also not helpful to [Darwinism]; see Behe, 2010, pp. 419-445.] Sanford concludes that the frequency and generally harmful or neutral nature of mutations prevents them from being useful to any scheme of random evolution.

[…]In the next section of the book, Sanford examines natural selection and asks whether “nature” can “select” in favor of the exceedingly rare “beneficial” mutations and against the deleterious mutations. The concept of natural selection is generally that the organisms that are best adapted to their environment will survive and reproduce, while the less fit will not. Sanford points out that this may be the case with some organisms, but more commonly, selection involves chance and luck. But could this process select against harmful mutations and allow less harmful or even beneficial mutations to thrive? According to Sanford, there are significant challenges to this notion.

Stanford is a co-author of an academic book on these issues that has Dembski and Behe as co-authors.

Now, I do have to post something more complicated about this, which you can skip – it’s an abstract of a paper he co-authored from that book:

Most deleterious mutations have very slight effects on total fitness, and it has become clear that below a certain fitness effect threshold, such low-impact mutations fail to respond to natural selection. The existence of such a selection threshold suggests that many low-impact deleterious mutations should accumulate continuously, resulting in relentless erosion of genetic information. In this paper, we use numerical simulation to examine this problem of selection threshold.

The objective of this research was to investigate the effect of various biological factors individually and jointly on mutation accumulation in a model human population. For this purpose, we used a recently-developed, biologically-realistic numerical simulation program, Mendel’s Accountant. This program introduces new mutations into the population every generation and tracks each mutation through the processes of recombination, gamete formation, mating, and transmission to the new offspring. This method tracks which individuals survive to reproduce after selection, and records the transmission of each surviving mutation every generation. This allows a detailed mechanistic accounting of each mutation that enters and leaves the population over the course of many generations. We term this type of analysis genetic accounting.

Across all reasonable parameters settings, we observed that high impact mutations were selected away with very high efficiency, while very low impact mutations accumulated just as if there was no selection operating. There was always a large transitional zone, wherein mutations with intermediate fitness effects accumulated continuously, but at a lower rate than would occur in the absence of selection. To characterize the accumulation of mutations of different fitness effect we developed a new statistic, selection threshold (STd), which is an empirically determined value for a given population. A population’s selection threshold is defined as that fitness effect wherein deleterious mutations are accumulating at exactly half the rate expected in the absence of selection. This threshold is mid-way between entirely selectable, and entirely unselectable, mutation effects.

Our investigations reveal that under a very wide range of parameter values, selection thresholds for deleterious mutations are surprisingly high. Our analyses of the selection threshold problem indicate that given even modest levels of noise affecting either the genotype-phenotype relationship or the genotypic fitness-survival-reproduction relationship, accumulation of low-impact mutations continually degrades fitness, and this degradation is far more serious than has been previously acknowledged. Simulations based on recently published values for mutation rate and effect-distribution in humans show a steady decline in fitness that is not even halted by extremely intense selection pressure (12 offspring per female, 10 selectively removed). Indeed, we find that under most realistic circumstances, the large majority of harmful mutations are essentially unaffected by natural selection and continue to accumulate unhindered. This finding has major theoretical implications and raises the question, “What mechanism can preserve the many low-impact nucleotide positions that constitute most of the information within a genome?”

Now I have been told by JoeCoder that there are many critical responses to his hypothesis, most of which have to do with whether natural selection can overcome the difficulty he is laying out. But since this is not my area of expertise, there is not much I can say to adjudicate here. Take it for what it is.

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