Tag Archives: Faith

Is the taxpayer-funded scientific bureaucracy self-correcting?

Consider this post from Evolution News which talks about a paper in the prestigious pro-naturalism journal Science that is drawing a lot of criticisms. (H/T Melissa, Jonathan)

Excerpt:

Last December we reported on a controversial paper published in Science which claimed to have discovered bacteria that feed on arsenic instead of phosphorous. According to NASA, this research promised to provide “an astrobiology finding that will impact the search for evidence of extraterrestrial life.” At that time the media reported things like:

  • scientists discovered “a bacteria whose DNA is completely alien to what we know today” (Wired)
  • the “bacteria is made of arsenic” (Wired)
  • the bacteria is “capable of using arsenic to build its DNA, RNA, proteins, and cell membranes” (Gizmodo)
  • the paper had reported “arsenic-based life” which is “very alien in terms of how it’s put together” and “NASA has, in a very real sense, discovered a form of alien life” (io9)
  • “you can potentially cross phosphorus off the list of elements required for life” (Nature)

But soon after the original Science paper was published, credible scientists began critiquing the paper’s claims. In the June 3, 2011 issue of Science, several of those scientists have published comments critiquing the original paper. Many of their criticisms focus on the claim that the original paper did not establish or rule out the possibility that the bacteria are not still living off of phosphorous.

So you have a paper being published that everyone is excited about because it helps the naturalists to close gaps in their worldview. But was it good science? The Evolution News piece goes on to list the criticisms of the paper.

And here is the result:

Of course the authors of the original paper, including lead-author Felisa Wolf-Simon, co-authored a reply to the criticisms which should also be read. But critics remain unconvinced. Nature news recently quoted Barry Rosen of Florida International University stating, “I have not found anybody outside of [Wolfe-Simon’s] laboratory who supports the work.” Likewise, Rosie Redfield observes:

“With so many mistakes pointed out, there should be at least some where the authors say, ‘you’re right, we should have done that but we didn’t’,” Redfield says. “This as an entirely a ‘we were right’ response, and that’s a bad sign in science.”

Despite the high levels of skepticism of claims of arsenophilic bacteria, Nature reports that few scientists have taken the initiative to attempt to experimentally reproduce the claims made in the original paper:

However, most labs seem too busy to spend time replicating work that they feel is fundamentally flawed and is not likely to be published in high-impact journals. So principal investigators are reluctant to spend their resources, and their students’ time, replicating the work. “If you extended the results to show there is no detectable arsenic, where could you publish that?” asks Simon Silver of the University of Illinois at Chicago, who critiqued the work in FEMS Microbiology Letters in January and on 24 May at the annual meeting of the American Society for Microbiology in New Orleans. “How could the young person who was asked to do that work ever get a job?” Refuting another scientist’s work also takes time that scientists could be spending on their own research. For instance, Helmann says he is installing a highly sensitive mass spectrometer that can measure trace amounts of elements. But, he says, “I’ve got my own science to do.”

Such admissions do not bode well for those who blindly believe in the perfectly objective, self-correcting nature of science. In this case, it seems safe to experimentally critique these claims since so many respected scientists have already expressed vocal skepticism. Yet experiments are apparently not yet forthcoming. What about areas of science where scientists are not able to express their dissent freely? For example, who would take time to experimentally critique claims that are central to neo-Darwinian theory, especially if it’s dangerous to one’s career? One hopes that science will become more self-correcting when it comes to claims made in support of materialism.

In light of what we now know about global warming research, shouldn’t we be a little more welcoming of whistleblowers and critics? Shouldn’t we be a little more careful about hastily approving research that agrees with the religion of naturalism, instead of checking it over thoroughly to make sure that it really is good science?

Peer-reviewed journal apologizes for censoring pro-ID article

From Evolution News. (Excerpt below, with links removed)

Excerpt:

In one of their favorite soundbytes, members of the Darwin lobby like to assert that intelligent design scientists do not publish peer-reviewed research. That claim is manifestly false. But the fact that intelligent design scholars do publish peer-reviewed articles is no thanks to Darwinists, many of whom do their best to ensure that peer-reviewed articles by intelligent design scientists never see the light of day.

Witness the brazen censorship earlier this year of an article by University of Texas, El Paso mathematics professor Granville Sewell, author of the book In the Beginning and Other Essays on Intelligent Design. Sewell’s article critical of Neo-Darwinism (“A Second Look at the Second Law”) was both peer-reviewed and accepted for publication by the journal Applied Mathematics Letters. That is, the article was accepted for publication until a Darwinist blogger who describes himself as an “opinionated computer science geek” wrote the journal editor to denounce the article, and the editor decided to pull Sewell’s article in violation of his journal’s own professional standards.

The publisher of Applied Mathematics Letters (Elsevier, the international science publisher) has now agreed to issue a public statement apologizing to Dr. Sewell as well as to pay $10,000 in attorney’s fees.

“It’s hard to imagine a more blatant assault on intellectual freedom and the free exchange of ideas,” says attorney Pete Lepiscopo with the California firm of Lepiscopo and Morrow, which represented Sewell.

Lepiscopo points out that in retracting Sewell’s article, Applied Mathematics Letters “effectively accepted the unsubstantiated word and unsupported opinion of an inconsequential blogger, with little or unknown academic background beyond a self-professed public acknowledgment that he was a ‘computer science grad’ and whose only known writings are self-posted blogs about movies, comics, and fantasy computer games.” This blogger’s unsupported opinion “trumped the views of an author who is a well respected mathematician with a Ph.D. in Mathematics from Purdue University; a fully-tenured Professor of Mathematics at the University of Texas–El Paso; an author of three books on numerical analysis and 40 articles published in respected journals; and a highly sought-after and frequent lecturer world-wide on mathematics and science.”

After Dr. Sewell’s article was pulled, Darwinian zealots crowed about their achievement and maliciously speculated that the article was withdrawn because it wasn’t really peer-reviewed or because it was somehow substandard. The journal, meanwhile, left Dr. Sewell to twist in the wind, seemingly endorsing the Darwinists’ smears. The journal editor Dr. Rodin wrote a groveling letter to the Darwinist blogger who complained to him in which he agreed that publishing Sewell’s article would involve “impropriety.” Rodin further apologized “for our erroneous judgement in even considering this paper for publication.”

Dr. Rodin and his journal now have to issue a public statement providing “their sincere and heartfelt apologies to Dr. Sewell… and welcom[ing] Dr. Sewell’s submission of future articles for possible publication.” More important than the apology, the journal has to set the record straight by reiterating that “Dr. Sewell’s article was peer-reviewed and accepted for publication” and by making clear that his article was not withdrawn because of “any errors or technical problems found by the reviewers or editors.”

Wow. I actually clicked on some of the links in the post at Evolution News and was carried off to the lands of naturalistic blogging. It’s amazing how confident they are in their little echo chambers, but I cannot fathom why this should be since they are unwilling to debate their views in public. To me, you can only know something if you are willing to hear the criticisms against it. If you censor all your opponents and hang around in little online chat rooms gloating to your choir about how smart you are and how right you are, why think that you really know anything about what you are talking about?

The only way to be sure about any issue is to listen to both sides in a debate, and let your opponents have a hearing. I would not feel confident in asserting anything if I only heard the arguments on one side of the question. Not only do the Darwinbots seem to be confident in asserting their views without hearing their opponents, they are actually arrogant and insulting about it. But before you can be trumpet your victory in a disagreement, doesn’t there have to be an actual debate first? Canceling the debate by censorship doesn’t mean that you won the debate.  It means you’re scared of debate.

Here’s what you do. Slap a defamation lawsuit on the blogger who complained for a million dollars and let them have their day in court to explain why they said what they said. Then we’ll find out which side has the blind faith and which side has the knowledge.

Is the Bible’s definition of faith opposed to logic and evidence?

Probably the biggest misconception that I encounter when defending the faith is the mistaken notion of what faith is. Today we are going to get to the bottom of what the Bible says faith is, once and for all. This post will be useful to Christians and atheists, alike.

What is faith according to the Bible?

I am going to reference this article from apologist Greg Koukl of Stand to Reason in my explanation.

Koukl cites three Biblical examples to support the idea that faith is not blind leap-of-faith wishing, but is based on evidence.

  1. Moses went out into the wilderness and he had that first encounter with the burning bush, and God gave him the directive to go back to Egypt and let his people go. Moses said, Yeah, right. What’s going to happen when they say, why should we believe you, Moses?God said, See that staff? Throw it down.Moses threw it down and it turned into a serpent.God said, See that serpent? Pick it up.And he picked it up and it turned back into a staff.God said, Now you take that and do that before the Jewish people and you do that before Pharaoh. And you do this number with the hail, and the frogs, and turning the Nile River into blood. You put the sun out. You do a bunch of other tricks to get their attention.And then comes this phrase: “So that they might know that there is a God in Israel.”
  2. [I]n Mark 2 you see Jesus preaching in a house, and you know the story where they take the roof off and let the paralytic down through the roof. Jesus said, “Your sins are forgiven.” And people get bugged because how can anyone forgive sins but God alone?Jesus understood what they were thinking and He said this: What’s harder to say, your sins are forgiven, or to rise, take up your pallet and go home?Now, I’ll tell you what would be harder for me to say : Arise, take up your pallet and go home. I can walk into any Bible study and say your sins are forgiven and nobody is going to know if I know what I am talking about or not. But if I lay hands on somebody in a wheelchair and I say, Take up your wheelchair and go home, and they sit there, I look pretty dumb because everyone knows nothing happened.But Jesus adds this. He says, “In order that you may know that the Son of Man has the power and authority to forgive sins, I say to you, arise, take up your pallet and go home.” And he got up and he got out. Notice the phrase “In order that you may know”. Same message, right?
  3. Move over to the Book of Acts. First sermon after Pentecost. Peter was up in front of this massive crowd. He was talking about the resurrection to which he was an eyewitness. He talked about fulfilled prophecy. He talked about the miraculous tongues and the miraculous manifestation of being able to speak in a language you don’t know. Do you think this is physical evidence to those people? I think so. Pretty powerful.Peter tells them, These men are not drunk as it seems, but rather this is a fulfillment of prophecy. David spoke of this. Jesus got out of the grave, and we saw him, and we proclaim this to you.Do you know how he ends his sermon? It’s really great. Acts 2:36. I’ve been a Christian 20 years and I didn’t see this until about a year ago. This is for all of those who think that if you can know it for sure, you can’t exercise faith in it. Here is what Peter said. Acts 2:36, “Therefore let all the house of Israel know for certain that God has made him both Lord and Christ, Messiah, this Jesus whom you crucified.” There it is again. “Know for certain.”

What is faith according to Bible-based theologians?

I am going to reference this article from theologian C. Michael Patton of Parchment and Pen in my explanation.

Patton explains that according to Reformation (conservative, Bible-based) theologians, faith has 3 parts:

  1. notitia – This is the basic informational foundation of our faith. It is best expressed by the word content. Faith, according to the Reformers must have content. You cannot have faith in nothing. There must be some referential propositional truth to which the faith points. The proposition “Christ rose from the grave,” for example, is a necessary information base that Christians must have.
  2. assensus – This is the assent or confidence that we have that the notitia is correct… This involves evidence which leads to the conviction of the truthfulness of the proposition… This involves intellectual assent and persuasion based upon critical thought… assensus… says, “I am persuaded to believe that Christ rose from the grave.”
  3. fiducia – This is the “resting” in the information based upon a conviction of its truthfulness. Fiducia is best expressed by the English word “trust.”… Fiducia is the personal subjective act of the will to take the final step. It is important to note that while fiducia goes beyond or transcends the intellect, it is built upon its foundation.

So, Biblical faith is really trust. Trust(3) can only occur after intellectual assent(2), based on evidence and thought. Intellectual assent(2) can only occur after the propositional information(1) is known.

The church today accepts 1 and 3, but denies 2. I call this “fideism” or “blind faith”. Ironically, activist atheists, (the New Atheists), also believe that faith is blind. The postmodern “emergent church” denies 1 and 2. A person could accept 1 and 2 but deny 3 by not re-prioritizing their life based on what they know to be true.

How do beliefs form, according to Christian philosophers?

I am going to reference a portion of chapter 3 of J.P. Moreland’s “Love Your God With All Your Mind” (i.e. – LYGWYM).

J.P. Moreland explains how beliefs form and how you can change them.

  1. Today, people are inclined to think that the sincerity and fervency of one’s beliefs are more important than the content… Nothing could be further from the truth… As far as reality is concerned, what matters is not whether I like a belief or how sincere I am in believing it but whether or not the belief is true. I am responsible for what I believe and, I might add, for what I refuse to believe because the content of what I do or do not believe makes a tremendous difference to what I become and how I act.
  2. A belief’s strength is the degree to which you are convinced the belief is true. As you gain ,evidence and support for a belief, its strength grows for you… The more certain you are of a belief… the more you rely on it as a basis for action.

But the most important point of the article is that your beliefs are not under the control of your will.

…Scripture holds us responsible for our beliefs since it commands us to embrace certain beliefs and warns us of the consequences of accepting other beliefs. On the other hand, experience teaches us that we cannot choose or change our beliefs by direct effort.

For example, if someone offered you $10,000 to believe right now that a pink elephant was sitting next to you, you could not really choose to believe this… If I want to change my beliefs about something, I can embark on a course of study in which I choose to think regularly about certain things, read certain pieces of evidence and argument, and try to find problems with evidence raised against the belief in question.

…by choosing to undertake a course of study… I can put myself in a position to undergo a change in… my beliefs… And… my character and behavior… will be transformed by these belief changes.

The article goes on to make some very informative comments on the relationship between apologetics and belief.