Tag Archives: Chirality

Could the building blocks of life have emerged spontaneously on the early Earth?

The origin of life

There are two problems related to the origin of the first living cell, on atheism:

  1. The problem of getting the building blocks needed to create life – i.e. the amino acids
  2. The problem of creating the functional sequences of amino acids and proteins that can support the minimal operations of a simple living cell

Normally, I concede the first problem and grant the atheist all the building blocks he needs. This is because step 2 is impossible. There is no way, on atheism, to form the sequences of amino acids that will fold up into proteins, and then to form the sequences of proteins that can be used to form everything else in the cell, including the DNA itself. But that’s tomorrow’s topic.

Today, let’s take a look at the problems with step 1.

The problem of getting the building blocks of life

Now you may have heard that some scientists managed to spark some gasses to generate most of the 20 amino acids found in living systems. These experiments are called the “Miller-Urey” experiments.

The IDEA center has a nice summary of origin-of-life research that explains a few of the main problems with step 1.

Miler and Urey used the wrong gasses:

Miller’s experiment requires a reducing methane and ammonia atmosphere,11, 12 however geochemical evidence says the atmosphere was hydrogen, water, and carbon dioxide (non-reducing).15, 16 The only amino acid produced in a such an atmosphere is glycine (and only when the hydrogen content is unreasonably high), and could not form the necessary building blocks of life.11

Miller and Urey didn’t account for UV of molecular instability:

Not only would UV radiation destroy any molecules that were made, but their own short lifespans would also greatly limit their numbers. For example, at 100ºC (boiling point of water), the half lives of the nucleic acids Adenine and Guanine are 1 year, uracil is 12 years, and cytozine is 19 days20 (nucleic acids and other important proteins such as chlorophyll and hemoglobin have never been synthesized in origin-of-life type experiments19).

Miller and Urey didn’t account for molecular oxygen:

We all have know ozone in the upper atmosphere protects life from harmful UV radiation. However, ozone is composed of oxygen which is the very gas that Stanley Miller-type experiments avoided, for it prevents the synthesis of organic molecules like the ones obtained from the experiments! Pre-biotic synthesis is in a “damned if you do, damned if you don’t” scenario. The chemistry does not work if there is oxygen because the atmosphere would be non-reducing, but if there is no UV-light-blocking oxygen (i.e. ozone – O3) in the atmosphere, the amino acids would be quickly destroyed by extremely high amounts of UV light (which would have been 100 times stronger than today on the early earth).20, 21, 22 This radiation could destroy methane within a few tens of years,23 and atmospheric ammonia within 30,000 years.15

And there were three other problems too:

At best the processes would likely create a dilute “thin soup,”24 destroyed by meteorite impacts every 10 million years.20, 25 This severely limits the time available to create pre-biotic chemicals and allow for the OOL.

Chemically speaking, life uses only “left-handed” (“L”) amino acids and “right-handed” (“R)” genetic molecules. This is called “chirality,” and any account of the origin of life must somehow explain the origin of chirality. Nearly all chemical reactions produce “racemic” mixtures–mixtures with products that are 50% L and 50% R.

Two more problems are not mentioned in the article. A non-peptide bond anywhere in the chain will ruin the chain. You need around 200 amino acids to make a protein. If any of the bonds is not a peptide bond, the chain will not work in a living system. Additionally, the article does not mention the need for the experimenter to intervene in order to prevent interfering cross-reactions that would prevent the amino acids from forming.

The progress of science

As science has progressed, the discoveries have proved out the need for a Creator and Designer in every area – the big bang, cosmic, galactic and stellar fine-tuning, the Cambrian explosion, etc…. and even the origin of life.

“More than 30 years of experimentation on the origin of life in the fields of chemical and molecular evolution have led to a better perception of the immensity of the problem of the origin of life on Earth rather than to its solution. At present all discussions on principal theories and experiments in the field either end in stalemate or in a confession of ignorance. New lines of thinking and experimentation must be tried.”

(Dose, Klaus, “The Origin of Life: More Questions Than Answers,” Interdisciplinary Science Reviews, Vol. 13, No. 4, 1988, p.348.)

Meanwhile, atheists are left to have blind faith that the progress scientists have made during decades of research will be miraculously overturned by new evidence that their beloved unobservable Flying Spaghetti Monster, (peas be upon him), did it. Hey! Don’t blaspheme against the non-supernatural powers of his noodly appendage! (Two Ph.Ds in biology will not save you from the wrath of the Darwoid cultists!)

To see how bad this gets for atheists, watch this video where Dawkins says that unobservable aliens evolved somewhere else and then seeded the Earth with life. He has no evidence that these aliens did evolve (no fossil record), and even worse, he does not know whether they even exist. Nevertheless, that is the state of atheism today – an unobservable Flying Spaghetti Monster evolved somewhere else and seeded the Earth with life.

What else could have happened?

Further study

One of my favorite resources on the origin of life is this interview from the University of California with former atheist and origin of life researcher Dean Kenyon. Kenyon, a professor of Biology at San Francisco State University, wrote the textbook on “chemical evolution”, which is the view that chemicals can arrange themselves in order to create the first living cell, without intervention.

This interview from the University of California with another origin of life researcher, Charles Thaxton, is also one of my favorites.

You’ll need Quicktime to see the videos, or buy the videos from ARN. (Kenyon, Thaxton) I have both of them – they rock!

Split decision on Texas evolution standards favors academic freedom

Over at the Discovery Institute’s Evolution News blog, they recently reported that the Texas State Board of Education reached a split decision on the state standards for teaching evolution.

Evolution News says this in their post:

Kudos to the New York Times for filing a story on the actions of the Texas State Board of Education that actually describes what happened last week. Unlike much of the rest of the newsmedia, the Times doesn’t tell only half of what happened or play up the hysterics. The story’s even-handed title is telling: “Split Outcome in Texas Battle on Teaching of Evolution.”

The NYT article they mentioned explains the compromise reached by the Texas State Board of Education.

First, the bad news:

…the board voted to drop a 20-year-old mandate that science teachers explore with their students the “strengths and weaknesses” of all theories.

But the board also passed some good amendments, among them this one:

…one that would compel science teachers to instruct students about aspects of the fossil record that do not neatly fit with the idea of species’ gradually changing over time, like the relatively sudden appearance of some species and the fact that others seem to remain unchanged for millions of years.

Let me explain why this is a big win for ID. One of my previous employers was a major academic publishing company. By major, I mean my alma mater’s campus library featured academic publication databases that I helped to code. In this company, it was well known that California and Texas were the two most important states, because their textbook standards set the guidelines for the other states.

The NYT article explains:

Whatever the 15-member board decides then will have consequences far beyond Texas, since the state is one of the largest buyers of textbooks in the nation. The new standards will be in place for the next decade, starting in 2010, and will influence the writing of the next generation of biology texts, which the state will order this summer.

John G. West of the Discovery Institute evaluates the board’s decision as positive:

“They did something truly remarkable today,” John G. West of the Discovery Institute, a group that questions Darwinism, said in a statement. “They voted to require students to analyze and evaluate some of the most important and controversial aspects of modern evolutionary theory.”

I actually have podcasts for you of the testimonies of pro-ID scholars given to the Texas Board. If you want to learn how scientists argue for academic freedom on issues of origins, you should listen to these three 15-minute podcasts.

  1. My favorite ID scholar Stepen C. Meyer testified on the Cambrian explosion and the fossil record, (podcast, article). Meyer holds a Ph.D in the Philosophy of Science from Cambridge University. I once saw him explain biological information using colorful lock-blocks, live. (He stole them from his children). I often draw it up for my co-workers on a white board, just like he does!
  2. Microbiologist Ralph Seelke testified about how his lab research that shows clear limits on how far bacteria can evolve, (podcast, article). Seelke holds a Ph.D in Microbiology from the University of Minnesota and the Mayo Graduate School of Medicine. He is a Professor in the Department of Biology and Earth Sciences at the University of Wisconsin-Superior.
  3. Biochemist Charles Garner testified on the chirality problem in chemical evolution, (podcast, article). He also discussed the importance of not glossing over the weaknesses of scientific theories. Garner holds a Ph.D. in Organic Chemistry from University of Colorado, Boulder. Garner is now a Associate Professor in the Department of Chemistry & Biochemistry at Baylor University.

For those looking for a definition of what intelligent design is, look here. I highly recommend the work of Canadian journalist Denyse O’Leary, who is probably the foremost expert on why there is an ID controversy. Her main blog on ID is called Post-Darwinist.

As a supporter of academic freedom, I sent a donation to the Discovery Institute’s Center for Science and Culture yesterday. The CSC is currently offering a free book with donations received before February 28th, 2009. For my annual donation, I chose Stephen C. Meyer’s forthcoming book “Signature in the Cell: DNA and the Evidence for Intelligent Design“.

On another note, I am also excited about Jay Richards’ forthcoming book, “Money, Greed, and God: Why Capitalism Is the Solution and Not the Problem“. Jay did a great lecture on basic economics for Christians and another great lecture on what Christians should think about global warming. Maybe his employer, the Acton Institute, will give me a free book if I send them a donation?

UPDATE: Casey Luskin just posted audio of Stephen C. Meyer responding to questions after is presentation at the hearing.