Tag Archives: Biology

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Prominent atheist philosopher gives mixed review of intelligent design

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Consider this report on a peer-reviewed assessment of intelligent design by the prominent atheist philosopher Thomas Nagel.

Excerpt:

Prof. Thomas Nagel, a self-declared atheist who earned his PhD. in philosophy at Harvard 45 years ago, who has been a professor at U.C. Berkeley, Princeton, and the last 28 years at New York University, and who has published ten books and more than 60 articles, has published an important essay, “Public Education and Intelligent Design,” in the Wiley InterScience Journal Philosophy & Public Affairs, Vol. 36, issue 2…

[…]Prof. Nagel’s paper is a significant and substantial opening, at America’s highest intellectual level, that encourages all intelligent, educated, informed individuals — particularly those whose interest in this issue derives from intellectual curiosity, not the emotional advocacy excitement for any side — that it is legitimate as a matter of data, science, and logic, divorced from all religious texts and doctrines, to consider that intelligent design may be a valid scientific approach to understanding how DNA and the complex chemical systems of life came to attain their present form. Prof. Nagel’s article is well worth the price to put it in the library of any inquiring mind.

The actual paper is here.

Now for the summary of the paper, with supporting quotes:

Professor Nagel has read ID-supportive works such as Dr. Behe’s Edge of Evolution (p. 192). He reports that based on his examination of their work, ID “does not seem to depend on massive distortions of the evidence and hopeless incoherencies in its interpretation” (pp. 196-197). He reports that ID does not depend on any assumption that ID is “immune to empirical evidence” in the way that believers in biblical literalism believe the bible is immune to disproof by evidence (p. 197). Thus, he says “ID is very different from creation science” (p. 196).

Prof. Nagel tells us that he “has for a long time been skeptical of the claims of traditional evolutionary theory to be the whole story about the history of life” (p. 202). He reports that it is “difficult to find in the accessible literature the grounds” for these claims.

Moreover, he goes farther. He reports that the “presently available evidence” comes “nothing close” to establishing “the sufficiency of standard evolutionary mechanisms to account for the entire evolution of life” (p. 199).

He notes that his judgment is supported by two prominent scientists (Marc Kirschner and John Gerhart, writing in the Oct. 2005 book Plausibility of Life), who also recognized that (prior to offering their own theory, at least) the “available evidence” did not “decisively settle[]” whether mutations in DNA “are entirely due to chance” (p. 191). And he cites one Stuart Kauffman, a “complexity theorist who defends a naturalistic theory of emergence,” that random mutation “is not sufficient” to explain DNA (p. 192).

Prof. Nagel acknowledges that “evolutionary biologists” regularly say that they are “confiden[t]” that “random mutations in DNA” are sufficient to account for “the complex chemical systems we observe” in living things (p. 199) — but he disagrees. “Rhetoric” is the word Professor Nagel uses to rejects these statements of credentialed evolutionary biologists. He judges that the evidence is NOT sufficient to rule out ID (p. 199).

He does not, however, say that the evidence compels acceptance of ID; instead, some may consider as an alternative to ID that an “as-yet undiscovered, purely naturalistic theory” will supply the deficiency, rather than some form of intelligence (p. 203).

In light of these considerations, Prof. Nagel says that “some part of the high school curriculum” “should” include “a frank discussion of the relation of evolutionary theory to religion” but that this need not occur in biology classes if the biology teachers would find this too much of a “burden” (p. 204). Significantly, Prof. Nagel — who is a professor of law as well as a professor of philosophy — concludes that, so long as the proposal is not introduced by religiously-motivated persons “as a fallback from something stronger,” but by persons “more neutral” or “without noticeable religious beliefs,” it would be constitutional to “mention” ID in public school science classes, because doing so genuinely furthers “the secular purpose of providing a better understanding of evolutionary theory and of the evidence for and against it” (p. 203). He makes clear that the “mention” must be a “noncommittal discussion of some of the issues” (p. 205).

So Nagel does NOT think that ID is a slam dunk, just that it is worth considering in science classrooms. Teach the controversy, that’s always the right approach. Be open-minded. Look at the evidence before you decide.

News

William Dembski reviews a new book by two theistic evolutionists

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From Patheos, an opening statement by William Dembski. This is the first part of a four-part debate with two scientists of the Biologos group, which advocates for theistic evolution. (And not to be confused with the Biologic Institute, which is supportive of intelligent design).

Excerpt:

Throughout their book, Giberson and Collins overconfidently proclaim that Darwinian evolution is a slam-dunk. Thus one reads, “There has been no scientific discovery since Darwin–not one–which has suggested that evolution is not the best explanation for the origin of species” (21-22). No theory is that good. Every theory admits anomalies. Every theory faces disconfirming evidence. Repeatedly readers are informed that mountains of overwhelming evidence support Darwin’s theory and that the authors are “unfamiliar with any premier scientists who reject evolution.” And just so there’s no doubt, in that same paragraph, they reiterate, “There are certainly a few scientists who reject evolution . . . But these are never premier scientists.”

Oh, you reject Darwinian evolution; you can’t be a premier scientist. What counterexample would convince Giberson and Collins to retract such a claim? How about Henry Schaefer’s signature on a “Dissent from Darwin” list? Schaefer heads the computational quantum chemistry lab at the University of Georgia, has published over a thousand peer-reviewed journal articles, and is one of the most widely cited chemists in the world. Then again, Giberson and Collins look askance at this list (according to them, it has too many emeriti professors and not enough biologists). But why engage in such posturing about scientific pecking order in the first place? The issue is not who’s doubting Darwinism, but what are the arguments for and against it and whether they have merit. Giberson and Collins’ constant drumming of mainstream and consensus science is beside the point–science progresses by diverging from the mainstream and by breaking with consensus.

Because Giberson and Collins assert that natural selection is such a powerful mechanism for driving evolution–and one that admits no reasoned dissent–it’s worth recounting here briefly why the intelligent design community is so skeptical of it. It’s not, as theistic evolutionists often suggest, that we have a desperate need to shore up faith and morality and are using ID as our instrument of choice to accomplish that end. Rather, it’s that natural selection is, in essence, a trial and error tinkering mechanism for which all evidence suggests that its power is quite limited. Trial and error works fine when you have something that’s functional and are trying to enhance it or adapt it to a new situation.

But for natural selection, as a trial and error mechanism, to traverse vast swatches of biological function space, we need to see an extended series of small gradual structural changes (under neo-Darwinism, these are genetic mutations leaving effects at the phenotypic level) that continually improve, or at least maintain, function, with evolving functions and evolving structures covarying and reinforcing each other. But we know of no detailed testable (macro-)evolutionary pathways like this in any field, whether in the evolution of living forms or in the evolution of language or in the evolution of technologies. In fact, when we can trace such evolutionary pathways, we find that significant change happens in creative leaps, not via trial and error tinkering.

Everyone who has read Dembski’s opening remarks in this four-part series is raving about the quality of what he’s written. I was hoping to wait for the response before publishing his opening salvo, so we could balance it, but no reply has appeared yet. For me, there is only one issue in the debate about the origin of life: if natural causes can create life from non-life with the time and resources available on the early Earth, then show me the mechanism. That’s all I want to see – the evidence that natural causes can do the creating that the naturalists say that it can do. I don’t want to hear about feelings, possibilities, what God could or couldn’t do, philosophy, what church you attend, your favorite hymn, the way you were raised, your religious experiences, etc. I just want to see you prove that nature can do all the creating that you say it can do.

News

What is the best explanation for the Cambrian fossil record?

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i found an interesting video that explores a mystery in the Cambrian fossil record.

Richard Dawkins explains the mystery in his famous book “The Blind Watchmaker”.

Excerpt:

“Eldredge and Gould certainly would agree that some very important gaps really are due to imperfections in the fossil record. Very big gaps, too. For example the Cambrian strata of rocks, vintage about 600 million years, are the oldest ones in which we find most of the major invertebrate groups. And we find many of them already in an advanced state of evolution, the very first time they appear. It is as though they were just planted there, without any evolutionary history.” (Dawkins, Richard [zoologist and Professor for the Public Understanding of Science, Oxford University], “The Blind Watchmaker,” [1986], Penguin: London, 1991, reprint, p.229)

He’s referring to prominent paleontologists Niles Eldredge and Stephen Jay Gould.

Now let’s watch the video.

Part 1 of 2: (41 minutes)

Part 2 of 2: (33 minutes)

This documentary has a mix of scholars who accept the standard naturalistic explanation for the Cambrian explosion, and some who are skeptical of the standard explanation. The first three scholars in the list below are considered to be world-renown experts in the Cambrian era fossils.

List of scholars:

Simon Conway Morris is Professor of Palaeobiology at the University of Cambridge and one of the world’s leading evolutionary paleontologists. He is noted in particular for his contributions to the understanding of the Cambrian Explosion and the fossils found in the Burgess Shale. Elected as a Fellow of the Royal Society (United Kingdom) in 1990, he also has been awarded the Walcott Medal of the National Academy of Sciences (United States). Dr. Conway Morris is author of the noted books The Crucible of Creation: The Burgess Shale and the Rise of Animals (1998) and Life’s Solution: Inevitable Humans in a Lonely Universe (2003). His views about the extent as well as the limits of Neo-Darwinism can be found in his article “Darwin was right. Up to a point.”

James Valentine is Emeritus Professor in the Department of Integrative Biology at the University of California, Berkeley, where he is also affiliated with the Museum of Paleontology and the Center for Integrative Genomics. He is one of the world’s leading experts on the Cambrian Explosion, and is the author of numerous technical articles on the subject, as well as author of the books On the Origin of Phyla and Evolutionary Paleoecology of the Marine Biosphere, co-author of Evolution and Evolving, and editor of Phanerozoic Diversity Patterns: Profiles in Macroevolution.

Paul Chien is a Professor in the Department of Biology at the University of San Francisco. A marine biologist, Dr. Chien received his Ph.D. in Biology from the University of California at Irvine, and he was a postdoctoral fellow at the California Institute of Technology (Caltech). Dr. Chien’s work has been published in over fifty technical journals, and he has spoken internationally, and on numerous occasions, from Brazil to mainland China—where he has also been involved in cooperative research programs. Dr. Chien has done research in the renowned fossil beds of Chengjiang, China.

Jonathan Wells is currently a Senior Research Biologist at the Discovery Institute. He holds two Ph.D.s, one in Molecular and Cell Biology from the University of California at Berkeley, and one in Religious Studies from Yale University. He has worked as a postdoctoral research biologist at the University of California at Berkeley and the supervisor of a medical laboratory in Fairfield, California, and he has taught biology at California State University in Hayward. Dr. Wells has published articles in numerous journals, and he is author of Icons of Evolution: Why much of what we teach about evolution is wrong and The Politically-Incorrect Guide to Darwinism and Intelligent Design, and co-author of The Design of Life.

Richard Sternberg is a Research Scientist at the Biologic Institute and a Research Collaborator at the Smithsonian’s National Museum of Natural History. He is an evolutionary biologist with interests in the relation between genes and morphological homologies, and the nature of genomic “information.” He holds a Ph.D. in Biology (Molecular Evolution) from Florida International University and a Ph.D. in Systems Science (Theoretical Biology) from Binghamton University. From 2001-2007, he served as a staff scientist at the National Center for Biotechnology Information, and from 2001-2007 he was a Research Associate at the Smithsonian’s National Museum of Natural History. Dr. Sternberg’s website can be visited here.

Douglas Axe is Director of Biologic Institute. His research uses both experiments and computer simulations to examine the functional and structural constraints on the evolution of proteins and protein systems. After earning his Ph.D. at the California Institute of Technology, Dr. Axe held postdoctoral and research scientist positions at the University of Cambridge, the Cambridge Medical Research Council Centre, and the Babraham Institute in Cambridge. His work has been reviewed in Nature and featured in a number of books, magazines and newspaper articles, including Life’s Solution by Simon Conway Morris, The Edge of Evolution by Michael Behe, and Signature in the Cell by Stephen Meyer.

Paul Nelson is a philosopher of biology, specializing in evolutionary developmental biology (evo-devo). He earned his Ph.D. from the University of Chicago in 1998, and he is presently an Adjunct Professor in the M.A. Program in Science & Religion at Biola University. He has published articles in such journals as Biology & Philosophy and Zygon and has contributed essays to numerous anthologies.

Stephen Meyer is Director of the Center for Science and Culture at Discovery Institute. Formerly a geophysicist with Atlantic Richfield Company (ARCO), Dr. Meyer earned his Ph.D. in the history and philosophy of science at Cambridge University as a Rotary International Scholar. From 1990-2002, he was on the faculty of Whitworth College. Dr. Meyer is author of peer-reviewed publications in technical, scientific, philosophical and other books and journals. His latest book is Signature in the Cell: DNA and the Evidence for Intelligent Design. His other books include Darwinism, Design and Public Education and Explore Evolution. Dr. Meyer’s website can be visited here.

If you like the video, you can buy the DVD here.

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