Tag Archives: Adaptation

Polemics

Is the argument for intelligent design based on ignorance?

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From Uncommon Descent. (IC = irreducible complexity, FSCI = functional specific complex information)

Excerpt:

First, ID is not, as its opponents suggest, a purely negative argument that material forces are insufficient to account for IC and FSCI.  At its root ID is an abductive conclusion (i.e., inference to best explanation) concerning the data.  This conclusion may be stated in summary as follows:

1.  Living things display IC and FSCI.

2.  Material forces have never been shown to produce IC and FSCI.

3.  Intelligent agents routinely produce IC and FSCI.

4.  Therefore, based on the evidence that we have in front of us, the best explanation for the presence of IC and FSCI in living things is that they are the result of acts of an intelligent agent.

The second reason the “argument from ignorance” objection fails is that the naysayers’ assertion that ID depends on an “absence of evidence” is simply false.  In fact, ID rests on evidence of absence.  In his Introduction to Logic Irving Marmer Copi writes of evidence of absence as follows:

In some circumstances it can be safely assumed that if a certain event had occurred, evidence of it could be discovered by qualified investigators. In such circumstances it is perfectly reasonable to take the absence of proof of its occurrence as positive proof of its non-occurrence.

How does this apply to the Neo-Darwinian claim that undirected material forces can produce IC and FSCI?  Charles Darwin published Origin of Species in 1859.  In the 152 years since that time literally tens of thousands of highly qualified investigators have worked feverishly attempting to demonstrate that undirected material forces can produce IC and FSCI.  They have failed utterly.

Has there been a reasonable investigation by qualified investigators?  By any fair measure there has been.  Has that 152 year-long investigation shown how undirected material forces can account for IC or FSCI?  It has not.

Therefore, simple logic dictates that “it is perfectly reasonable to take the absence of proof” that undirected material forces can account for IC and FSCI as “positive proof of its non-occurrence.”

The argument from intelligent design is based on what we know. The hope that biological information has a naturalistic cause is based on what we don’t know. As science progresses, the evidence for intelligent causes in biology becomes more clear.

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Commentary

Biologist expresses doubts about the sufficiency of Darwinian mechanisms

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From pro-naturalism Discover Magazine. (H/T Uncommon Descent)

Excerpt:

All scientists agree that evolution has occurred… The question is, is natural selection enough to explain evolution? … This is the problem I have with neo-Darwinists: They teach that what is generating novelty is the accumulation of random mutations in DNA, in a direction set by natural selection… Natural selection eliminates and maybe maintains, but it doesn’t create. …

I was taught over and over again that the accumulation of random mutations led to evolutionary change — led to new species. I believed it until I looked for evidence. …
There is no gradualism in the fossil record… ‘Punctuated equilibrium’ was invented to describe the discontinuity. …
The critics, including the creationist critics, are right about their criticism. It’s just that they’ve got nothing to offer but intelligent design or ‘God did it.’ They have no alternatives that are scientific. …

The evolutionary biologists believe the evolutionary pattern is a tree. It’s not. The evolutionary pattern is a web… [emphasis added].

(I took this extract verbatim from Jonathan’s post in Uncommon Descent, with his emphasis)

Margulis is a naturalist who believes in a naturalistic chain of causation from particles to people. But she is honest about the sufficiency of Darwinian mechanisms to explain ALL of the history of life. Maybe Darwinism isn’t the whole story. It’s part of the story for sure (micro-evolution), and there may even be common descent to some degree. But is it the whole story? Why aren’t we allowed to ask that question?

If all naturalists did was teach the evidence for and against evolution, instead of presenting as fact and brooking no scientific dissent, then I would not be so hostile to the public schools. So long as the public schools promote indoctrination instead of investigation, I will urge everyone I know to avoid them and to defund them as much as possible. The classroom is not the place for secular leftists to indoctrinate children in the religion of naturalism. They should teach what science and show, and allow discussion of alternative explanations, including the explanation of intelligent causation.

Commentary

Pro-ID scientist Ann Gauger interviewed on Mike Behe’s latest paper

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This is all written up at Evolution News.

First, remember that Behe’s peer-reviewed paper (PDF) was about whether evolutionary mechanisms were capable of creating any new information, that supports new functionality, that confers an evolutionary advantage.

Excerpt:

Losing information is one thing — like accidentally erasing a computer file (say, an embarrassing diplomatic cable) where, it turns out in retrospect, you’re better off now that’s it not there anymore. Gaining information, building it up slowly from nothing, is quite another and more impressive feat. Yet it’s not the loss of function, and the required underlying information, but its gain that Darwinian evolution is primarily challenged to account for.

That’s the paradox highlighted in Michael Behe’s new review essay in Quarterly Review of Biology (“Experimental Evolution, Loss-of-Function Mutations, and “The First Rule of Adaptive Evolution“). It’s one of those peer-reviewed, Darwin-doubting biology journal essays that, as we’re confidently assured by the likes of the aforesaid Jerry Coyne, don’t actually exist. Casey Luskin has been doing an excellent job in this space of detailing Michael Behe’s conclusions. Reviewing the expansive literature dealing with investigations of viral and bacterial evolution, Dr. Behe shows that adaptive instances of the “diminishment or elimination” of Functional Coding ElemenTs (FCTs) in the genome overwhelmingly outnumber “gain-of-FCT events.” Seemingly, under Darwinian assumptions, even as functionality is being painstakingly built up that’s of use to an organism in promoting survival, the same creature should, much faster, be impoverished of function to the point of being driven out of existence.

And then the Evolution News post has an interview with Ann Gauger, (whose peer-reviewed publications have been featured before on this blog).

Here’s one of the questions:

… In your own research with Dr. Seelke, you found that cells chose to “reduce or eliminate function.” But with vastly bigger populations and vastly more time, wouldn’t we be justified in expecting gene fixes too, even if far fewer in number?

And her reply in part:

For most organisms in the wild, the environment is constantly changing. Organisms rarely encounter prolonged and uniform selection in one direction. In turn, changing selection prevents most genetic variants from getting fixed in the population. In addition, most mutations that accumulate in populations are neutral or weakly deleterious, and most beneficial mutations are only weakly beneficial. This means that it takes a very long time, if ever, for a weakly beneficial mutation to spread throughout the population, or for harmful mutations to be eliminated. If more than one mutation is required to get a new function, the problem quickly becomes beyond reach. Evolutionary biologists have begun to realize the problem of getting complex adaptations, and are trying to find answers.

The problem is the level of complexity that is required, from the earliest stages of life. For example, just to modify one protein to perform a new function or interact with a new partner can require multiple mutations. Yet many specialized proteins, adapted to work together with specialized RNAs, are required to build a ribosome. And until you have ribosomes, you cannot translate genes into proteins. We haven’t a clue how this ability evolved.

It sounds this problem of getting beneficial mutations and keeping them around is an intractable problem, at least on a naturalist worldview. It will be interesting to see how the naturalists respond to the peer-reviewed work by Behe and Gauger. The only way to know if Behe and Gauger are right is to let the naturalists talk back. It would be nice to see a formal debate on this evidence, wouldn’t it? I’m sure that the ID people would favor a debate, but the evolutionists probably wouldn’t, since they prefer to silence and expel anyone who disagrees with them.

In addition to the new papers by Michael Behe and Ann Gauger I mentioned above, I wrote about Doug Axe’s recent research paper here. He is the Director of the Biologic Institute, where Ann works.

Debates featuring Mike Behe

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